org.ujmp.core.treematrix

Class ObjectTreeMatrix

java.lang.Object

java.lang.Number

org.ujmp.core.AbstractMatrix

org.ujmp.core.genericmatrix.stub.AbstractGenericMatrix<T>

org.ujmp.core.numbermatrix.stub.AbstractNumberMatrix<java.lang.Double>

org.ujmp.core.doublematrix.stub.AbstractDoubleMatrix

org.ujmp.core.doublematrix.stub.AbstractDoubleMatrix2D

org.ujmp.core.doublematrix.stub.AbstractSparseDoubleMatrix2D

org.ujmp.core.treematrix.AbstractTreeMatrix<java.lang.Object>

org.ujmp.core.treematrix.ObjectTreeMatrix

All Implemented Interfaces:

java.io.Serializable, java.lang.Cloneable, java.lang.Comparable<Matrix>, javax.swing.tree.TreeModel, HasMetaData, BaseMatrix, BooleanCalculations, CanPerformCalculations, DenseMatrix, DenseMatrix2D, DenseMatrixMultiD, BaseDoubleMatrix, BasicDoubleCalculations, DoubleCalculations, BasicEntrywiseDoubleCalculations, CreatorDoubleCalculations, EntrywiseDoubleCalculations, HyperbolicDoubleCalculations, MiscEntrywiseDoubleCalculations, RoundingDoubleCalculations, TrigonometricDoubleCalculations, DecompositionDoubleCalculations, DiscretizeCalculations, GeneralDoubleCalculations, MiscGeneralDoubleCalculations, MissingValueDoubleCalculations, StatisticalDoubleCalculations, DenseDoubleMatrix, DenseDoubleMatrix2D, DenseDoubleMatrixMultiD, DoubleMatrix, DoubleMatrix2D, DoubleMatrixMultiD, SparseDoubleMatrix, SparseDoubleMatrix2D, SparseDoubleMatrixMultiD, BaseGenericMatrix<java.lang.Double>, DenseGenericMatrix<java.lang.Double>, DenseGenericMatrix2D<java.lang.Double>, DenseGenericMatrixMultiD<java.lang.Double>, GenericMatrix<java.lang.Double>, GenericMatrix2D<java.lang.Double>, GenericMatrixMultiD<java.lang.Double>, SparseGenericMatrix<java.lang.Double>, SparseGenericMatrix2D<java.lang.Double>, SparseGenericMatrixMultiD<java.lang.Double>, BaseMatrixProperties, Clearable, Conversions, CoordinateFunctions, CoreObject, DistanceMeasures, ExtendedMatrixProperties, GettersAndSetters, HasDescription, HasGUIObject, HasId, HasLabel, IntCalculations, Matrix, Matrix2D, MatrixMultiD, BaseNumberMatrix<java.lang.Double>, DenseNumberMatrix<java.lang.Double>, DenseNumberMatrix2D<java.lang.Double>, DenseNumberMatrixMultiD<java.lang.Double>, NumberMatrix<java.lang.Double>, NumberMatrix2D<java.lang.Double>, NumberMatrixMultiD<java.lang.Double>, SparseNumberMatrix<java.lang.Double>, SparseNumberMatrix2D<java.lang.Double>, SparseNumberMatrixMultiD<java.lang.Double>, ObjectCalculations, SparseMatrix, SparseMatrix2D, SparseMatrixMultiD, StringCalculations, Tree<java.lang.Object>, TreeMatrix<java.lang.Object>

public class ObjectTreeMatrix
extends AbstractTreeMatrix<java.lang.Object>

See Also:

Serialized Form

Field Summary

Fields inherited from interface org.ujmp.core.doublematrix.SparseDoubleMatrix2D

Factory

Fields inherited from interface org.ujmp.core.Matrix

chol, divideMatrix, divideScalar, eig, inv, lu, minusMatrix, minusScalar, mtimes, plusMatrix, plusScalar, qr, solve, svd, timesMatrix, timesScalar, transpose

Fields inherited from interface org.ujmp.core.BaseMatrix

ALL, COLUMN, LINK, NEW, NONE, ORIG, ROW, X, Y, Z

Fields inherited from interface org.ujmp.core.annotation.HasMetaData

DIMENSIONMETADATA

Fields inherited from interface org.ujmp.core.interfaces.HasLabel

LABEL

Fields inherited from interface org.ujmp.core.interfaces.HasDescription

DESCRIPTION

Fields inherited from interface org.ujmp.core.interfaces.HasId

ID

Fields inherited from interface org.ujmp.core.doublematrix.DoubleMatrix

Factory

Constructor Summary

Constructors

Constructor and Description
ObjectTreeMatrix(java.lang.Object o)

Method Summary

Modifier and Type	Method and Description
java.lang.Iterable<long[]>	availableCoordinates() Returns an Iterator that only goes over the coordinates in the Matrix that are stored.
void	clear()
java.util.List<java.lang.Object>	getChildren(java.lang.Object o)
java.util.Collection<java.lang.Object>	getObjectList()
java.util.Map<java.lang.Object,java.lang.Object>	getParentMap()
java.lang.Object	getRoot()
void	setRoot(java.lang.Object o)

Methods inherited from class org.ujmp.core.treematrix.AbstractTreeMatrix

addChild, addChildren, addObject, addTreeModelListener, containsCoordinates, getChild, getChildCount, getChildCountRecursive, getDouble, getDouble, getIndexOfChild, getNumberOfObjects, getObject, getParent, getSize, isChild, isChild, isLeaf, removeChild, removeTreeModelListener, setDouble, setDouble, valueForPathChanged

Methods inherited from class org.ujmp.core.doublematrix.stub.AbstractSparseDoubleMatrix2D

getDimensionCount, getObject, getObject, isSparse, setObject, setObject

Methods inherited from class org.ujmp.core.doublematrix.stub.AbstractDoubleMatrix2D

getDouble, setDouble

Methods inherited from class org.ujmp.core.doublematrix.stub.AbstractDoubleMatrix

getAsDouble, getNumber, getObject, getValueType, setAsDouble, setNumber, setObject

Methods inherited from class org.ujmp.core.genericmatrix.stub.AbstractGenericMatrix

getAsObject, setAsObject

Methods inherited from class org.ujmp.core.AbstractMatrix

abs, addMissing, allCoordinates, allValues, and, and, append, appendHorizontally, appendVertically, atimes, bigDecimalValue, bigIntegerValue, booleanValue, bootstrap, bootstrap, ceil, center, charValue, chebyshevDistanceTo, chol, clone, compareTo, containsBigDecimal, containsBigInteger, containsBoolean, containsByte, containsChar, containsDate, containsDouble, containsFloat, containsInt, containsLong, containsMissingValues, containsNull, containsObject, containsShort, containsString, convert, convertEncoding, corrcoef, cos, cosh, cosineSimilarity, cosineSimilarityTo, countMissing, cov, cumprod, cumsum, dateValue, delete, delete, delete, deleteColumns, deleteColumns, deleteColumnsWithMissingValues, deleteRows, deleteRows, deleteRowsWithMissingValues, det, diag, diff, discretize, discretize, discretizeToBoolean, discretizeToColumns, divide, divide, divide, divide, doubleValue, eig, eigSymm, eq, eq, equals, equalsAnnotation, equalsContent, euklideanDistance, euklideanDistanceTo, exp, exportTo, extractAnnotation, eye, fadeIn, fadeOut, fill, fireValueChanged, fireValueChanged, fireValueChanged, flipdim, floatValue, floor, ge, ge, getAbsoluteValueMean, getAbsoluteValueSum, getAsBigDecimal, getAsBigInteger, getAsBoolean, getAsByte, getAsByteArray, getAsChar, getAsDate, getAsFloat, getAsInt, getAsLong, getAsMatrix, getAsShort, getAsString, getColumnCount, getColumnForLabel, getColumnLabel, getColumnList, getCoordinatesOfMaximum, getCoordinatesOfMinimum, getCoreObjectId, getDescription, getDimensionLabel, getDimensionMetaData, getEuklideanValue, getFactory, getGUIObject, getId, getLabel, getLabelObject, getMaxValue, getMeanValue, getMetaData, getMetaData, getMetaDataDimensionMatrix, getMetaDataDouble, getMetaDataMatrix, getMetaDataString, getMinValue, getPositionForLabel, getPreferredObject, getRMS, getRowCount, getRowForLabel, getRowLabel, getRowList, getSize, getStdValue, getValueCount, getValueSum, getZCount, ginv, grayScale, gt, gt, importFrom, impute, includeAnnotation, indexOfMax, indexOfMin, intValue, inv, invSPD, invSymm, isColumnVector, isDiagonal, isEmpty, isMultidimensionalMatrix, isReadOnly, isResizable, isRowVector, isScalar, isSingular, isSPD, isSquare, isSymmetric, isTransient, le, le, log, log10, log2, logistic, longValue, lowerCase, lt, lt, lu, manhattenDistance, manhattenDistanceTo, max, mean, min, minkowskiDistance, minkowskiDistanceTo, minus, minus, minus, minus, mtimes, mtimes, mutualInf, nans, ne, ne, nonZeroCoordinates, norm1, norm2, normalize, normF, normInf, not, ones, or, or, pairedTTest, pdet, pinv, pinv, plus, plus, plus, plus, power, power, princomp, prod, qr, rand, randn, rank, removePunctuation, removeWords, replace, replaceMissingBy, replaceRegex, replaceRegex, reshape, round, save, save, select, select, select, selectColumns, selectColumns, selectedCoordinates, selectedCoordinates, selectRows, selectRows, setAsBigDecimal, setAsBigInteger, setAsBoolean, setAsByte, setAsByteArray, setAsChar, setAsDate, setAsFloat, setAsInt, setAsLong, setAsMatrix, setAsShort, setAsString, setColumnLabel, setContent, setDescription, setDimensionLabel, setDimensionMetaData, setId, setLabel, setMetaData, setMetaData, setMetaDataDimensionMatrix, setRowLabel, setSize, share, share, showGUI, shuffle, sign, sin, sinh, solve, solveSPD, solveSymm, sortrows, sqrt, squeeze, standardize, std, stem, stringValue, subMatrix, sum, svd, svd, swap, tan, tanh, tanh, tfIdf, times, times, times, times, toBigDecimalArray, toBigDecimalMatrix, toBigIntegerArray, toBigIntegerMatrix, toBooleanArray, toBooleanMatrix, toByteArray, toByteMatrix, toCharArray, toCharMatrix, toColumnVector, toDateArray, toDoubleArray, toDoubleMatrix, toFloatArray, toFloatMatrix, toHtml, toIntArray, toIntMatrix, toListMatrix, toLongArray, toLongMatrix, toMapMatrix, toObjectArray, toObjectMatrix, toRowVector, toSetMatrix, toShortArray, toShortMatrix, toString, toStringArray, toStringMatrix, trace, translate, transpose, transpose, transpose, tril, triu, unique, uniqueValueCount, upperCase, var, xor, xor, zeros

Methods inherited from class java.lang.Number

byteValue, shortValue

Methods inherited from class java.lang.Object

getClass, hashCode, notify, notifyAll, wait, wait, wait

Methods inherited from interface org.ujmp.core.genericmatrix.GenericMatrix2D

getObject, getObject, setObject, setObject

Methods inherited from interface org.ujmp.core.Matrix

clone, exportTo, fireValueChanged, fireValueChanged, fireValueChanged, importFrom, save, save, share, share, toHtml

Methods inherited from interface org.ujmp.core.BaseMatrix

getFactory

Methods inherited from interface org.ujmp.core.interfaces.BaseMatrixProperties

allValues, equals, equalsAnnotation, equalsContent, getColumnCount, getColumnList, getDimensionCount, getRowCount, getRowList, getSize, getValueCount, getValueType, getZCount, isColumnVector, isDiagonal, isEmpty, isMultidimensionalMatrix, isReadOnly, isResizable, isRowVector, isScalar, isSingular, isSparse, isSquare, isSymmetric, isTransient, setSize, toString

Methods inherited from interface org.ujmp.core.interfaces.CoreObject

getCoreObjectId

Methods inherited from interface org.ujmp.core.interfaces.HasGUIObject

getGUIObject, showGUI

Methods inherited from interface org.ujmp.core.interfaces.CoordinateFunctions

allCoordinates, getCoordinatesOfMaximum, getCoordinatesOfMinimum, nonZeroCoordinates, selectedCoordinates, selectedCoordinates

Methods inherited from interface org.ujmp.core.interfaces.GettersAndSetters

getAsBigDecimal, getAsBigInteger, getAsBoolean, getAsByte, getAsByteArray, getAsChar, getAsDate, getAsDouble, getAsFloat, getAsInt, getAsLong, getAsMatrix, getAsObject, getAsShort, getAsString, getPreferredObject, setAsBigDecimal, setAsBigInteger, setAsBoolean, setAsByte, setAsByteArray, setAsChar, setAsDate, setAsDouble, setAsFloat, setAsInt, setAsLong, setAsMatrix, setAsObject, setAsShort, setAsString, toBigDecimalArray, toBigIntegerArray, toBooleanArray, toByteArray, toCharArray, toDateArray, toDoubleArray, toFloatArray, toIntArray, toLongArray, toObjectArray, toShortArray, toStringArray

Methods inherited from interface org.ujmp.core.doublematrix.calculation.basic.BasicDoubleCalculations

atimes, divide, divide, divide, divide, minus, minus, minus, minus, mtimes, mtimes, plus, plus, plus, plus, times, times, times, times

Methods inherited from interface org.ujmp.core.doublematrix.calculation.entrywise.basic.BasicEntrywiseDoubleCalculations

abs, exp, log, log10, log2, logistic, power, power, sign, sqrt

Methods inherited from interface org.ujmp.core.doublematrix.calculation.entrywise.rounding.RoundingDoubleCalculations

ceil, floor, round

Methods inherited from interface org.ujmp.core.doublematrix.calculation.entrywise.hyperbolic.HyperbolicDoubleCalculations

cosh, sinh, tanh, tanh

Methods inherited from interface org.ujmp.core.doublematrix.calculation.entrywise.trigonometric.TrigonometricDoubleCalculations

cos, sin, tan

Methods inherited from interface org.ujmp.core.doublematrix.calculation.entrywise.creators.CreatorDoubleCalculations

eye, nans, ones, rand, randn, zeros

Methods inherited from interface org.ujmp.core.doublematrix.calculation.entrywise.misc.MiscEntrywiseDoubleCalculations

grayScale

Methods inherited from interface org.ujmp.core.doublematrix.calculation.general.statistical.StatisticalDoubleCalculations

corrcoef, cov, cumprod, cumsum, diff, indexOfMax, indexOfMin, max, mean, min, mutualInf, pairedTTest, prod, std, sum, var

Methods inherited from interface org.ujmp.core.doublematrix.calculation.general.decomposition.DecompositionDoubleCalculations

chol, eig, eigSymm, ginv, inv, invSPD, invSymm, lu, pinv, pinv, princomp, qr, solve, solveSPD, solveSymm, svd, svd

Methods inherited from interface org.ujmp.core.doublematrix.calculation.general.missingvalues.MissingValueDoubleCalculations

addMissing, countMissing, deleteColumnsWithMissingValues, deleteRowsWithMissingValues, impute

Methods inherited from interface org.ujmp.core.doublematrix.calculation.general.misc.MiscGeneralDoubleCalculations

append, appendHorizontally, appendVertically, center, fadeIn, fadeOut, normalize, replaceMissingBy, standardize

Methods inherited from interface org.ujmp.core.doublematrix.calculation.general.discretize.DiscretizeCalculations

discretize, discretize, discretizeToBoolean, discretizeToColumns

Methods inherited from interface org.ujmp.core.booleanmatrix.calculation.BooleanCalculations

and, and, eq, eq, ge, ge, gt, gt, le, le, lt, lt, ne, ne, not, or, or, xor, xor

Methods inherited from interface org.ujmp.core.stringmatrix.calculation.StringCalculations

convertEncoding, lowerCase, removePunctuation, removeWords, replaceRegex, replaceRegex, stem, tfIdf, translate, upperCase

Methods inherited from interface org.ujmp.core.objectmatrix.calculation.ObjectCalculations

bootstrap, bootstrap, convert, delete, delete, delete, deleteColumns, deleteColumns, deleteRows, deleteRows, diag, extractAnnotation, fill, flipdim, includeAnnotation, replace, reshape, select, select, select, selectColumns, selectColumns, selectRows, selectRows, shuffle, sortrows, squeeze, subMatrix, swap, toColumnVector, toRowVector, transpose, transpose, transpose, tril, triu, unique, uniqueValueCount

Methods inherited from interface org.ujmp.core.interfaces.DistanceMeasures

chebyshevDistanceTo, cosineSimilarity, cosineSimilarityTo, euklideanDistance, euklideanDistanceTo, manhattenDistance, manhattenDistanceTo, minkowskiDistance, minkowskiDistanceTo

Methods inherited from interface java.lang.Comparable

compareTo

Methods inherited from interface org.ujmp.core.annotation.HasMetaData

getColumnForLabel, getColumnLabel, getDimensionLabel, getDimensionMetaData, getMetaData, getMetaData, getMetaDataDimensionMatrix, getMetaDataDouble, getMetaDataMatrix, getMetaDataString, getPositionForLabel, getRowForLabel, getRowLabel, setColumnLabel, setDimensionLabel, setDimensionMetaData, setMetaData, setMetaData, setMetaDataDimensionMatrix, setRowLabel

Methods inherited from interface org.ujmp.core.interfaces.HasLabel

getLabel, getLabelObject, setLabel

Methods inherited from interface org.ujmp.core.interfaces.HasDescription

getDescription, setDescription

Methods inherited from interface org.ujmp.core.interfaces.HasId

getId, setId

Methods inherited from interface org.ujmp.core.interfaces.Conversions

toBigDecimalMatrix, toBigIntegerMatrix, toBooleanMatrix, toByteMatrix, toCharMatrix, toDoubleMatrix, toFloatMatrix, toIntMatrix, toListMatrix, toLongMatrix, toMapMatrix, toObjectMatrix, toSetMatrix, toShortMatrix, toStringMatrix

Methods inherited from interface org.ujmp.core.interfaces.ExtendedMatrixProperties

bigDecimalValue, bigIntegerValue, booleanValue, byteValue, charValue, containsBigDecimal, containsBigInteger, containsBoolean, containsByte, containsChar, containsDate, containsDouble, containsFloat, containsInt, containsLong, containsMissingValues, containsNull, containsObject, containsShort, containsString, dateValue, det, doubleValue, floatValue, getAbsoluteValueMean, getAbsoluteValueSum, getEuklideanValue, getMaxValue, getMeanValue, getMinValue, getRMS, getStdValue, getValueSum, intValue, isSPD, longValue, norm1, norm2, normF, normInf, pdet, rank, setContent, shortValue, stringValue, trace

Constructor Detail

ObjectTreeMatrix

public ObjectTreeMatrix(java.lang.Object o)

Method Detail

getParentMap

public java.util.Map<java.lang.Object,java.lang.Object> getParentMap()

clear

public final void clear()

availableCoordinates

public java.lang.Iterable<long[]> availableCoordinates()

Description copied from interface: CoordinateFunctions

Returns an Iterator that only goes over the coordinates in the Matrix that are stored. For most Matrices, this is the same as allCoordinates(). For sparse Matrices, it iterates only over the entries in it.

Specified by:

availableCoordinates in interface CoordinateFunctions

Specified by:

availableCoordinates in class AbstractSparseDoubleMatrix2D

Returns:

Iterable over the saved entries in a Matrix.

getChildren

public java.util.List<java.lang.Object> getChildren(java.lang.Object o)

getObjectList

public java.util.Collection<java.lang.Object> getObjectList()

getRoot

public java.lang.Object getRoot()

setRoot

public void setRoot(java.lang.Object o)