org.ujmp.core.listmatrix

Class AbstractListMatrix<E>

java.lang.Object

java.lang.Number

org.ujmp.core.AbstractMatrix

org.ujmp.core.genericmatrix.stub.AbstractGenericMatrix<A>

org.ujmp.core.genericmatrix.stub.AbstractDenseGenericMatrix<A>

org.ujmp.core.genericmatrix.stub.AbstractDenseGenericMatrix2D<E>

org.ujmp.core.listmatrix.AbstractListMatrix<E>

All Implemented Interfaces:

java.io.Serializable, java.lang.Cloneable, java.lang.Comparable<Matrix>, java.lang.Iterable<E>, java.util.Collection<E>, java.util.List<E>, HasMetaData, BaseMatrix, BooleanCalculations, CanPerformCalculations, DenseMatrix, DenseMatrix2D, DenseMatrixMultiD, BasicDoubleCalculations, DoubleCalculations, BasicEntrywiseDoubleCalculations, CreatorDoubleCalculations, EntrywiseDoubleCalculations, HyperbolicDoubleCalculations, MiscEntrywiseDoubleCalculations, RoundingDoubleCalculations, TrigonometricDoubleCalculations, DecompositionDoubleCalculations, DiscretizeCalculations, GeneralDoubleCalculations, MiscGeneralDoubleCalculations, MissingValueDoubleCalculations, StatisticalDoubleCalculations, BaseGenericMatrix<E>, DenseGenericMatrix<E>, DenseGenericMatrix2D<E>, DenseGenericMatrixMultiD<E>, GenericMatrix<E>, GenericMatrix2D<E>, GenericMatrixMultiD<E>, SparseGenericMatrix<E>, SparseGenericMatrix2D<E>, SparseGenericMatrixMultiD<E>, BaseMatrixProperties, Clearable, Conversions, CoordinateFunctions, CoreObject, DistanceMeasures, ExtendedMatrixProperties, GettersAndSetters, HasDescription, HasGUIObject, HasId, HasLabel, IntCalculations, ListMatrix<E>, Matrix, Matrix2D, MatrixMultiD, ObjectCalculations, SparseMatrix, SparseMatrix2D, SparseMatrixMultiD, StringCalculations

Direct Known Subclasses:

AbstractListDataSet, DefaultListMatrix, DirectoryMatrix, ZipFileMatrix

public abstract class AbstractListMatrix<E>
extends AbstractDenseGenericMatrix2D<E>
implements ListMatrix<E>

See Also:

Serialized Form

Field Summary

Fields inherited from interface org.ujmp.core.Matrix

chol, divideMatrix, divideScalar, eig, Factory, inv, lu, minusMatrix, minusScalar, mtimes, plusMatrix, plusScalar, qr, solve, svd, timesMatrix, timesScalar, transpose

Fields inherited from interface org.ujmp.core.BaseMatrix

ALL, COLUMN, LINK, NEW, NONE, ORIG, ROW, X, Y, Z

Fields inherited from interface org.ujmp.core.annotation.HasMetaData

DIMENSIONMETADATA

Fields inherited from interface org.ujmp.core.interfaces.HasLabel

LABEL

Fields inherited from interface org.ujmp.core.interfaces.HasDescription

DESCRIPTION

Fields inherited from interface org.ujmp.core.interfaces.HasId

ID

Fields inherited from interface org.ujmp.core.DenseMatrix2D

Factory

Fields inherited from interface org.ujmp.core.SparseMatrix2D

Factory

Constructor Summary

Constructors

Constructor and Description
AbstractListMatrix()

Method Summary

Modifier and Type	Method and Description
boolean	add(E t)
void	add(int index, E element)
boolean	addAll(java.util.Collection<? extends E> c)
boolean	addAll(int index, java.util.Collection<? extends E> c)
void	clear()
boolean	contains(java.lang.Object o)
boolean	containsAll(java.util.Collection<?> c)
abstract E	get(int index)
E	getLast()
E	getObject(long row, long column)
long[]	getSize()
int	indexOf(java.lang.Object o)
boolean	isEmpty()
java.util.Iterator<E>	iterator()
int	lastIndexOf(java.lang.Object o)
java.util.ListIterator<E>	listIterator()
java.util.ListIterator<E>	listIterator(int index)
E	remove(int index)
boolean	remove(java.lang.Object o)
boolean	removeAll(java.util.Collection<?> c)
boolean	retainAll(java.util.Collection<?> c)
E	set(int index, E element)
void	setObject(E value, long row, long column)
abstract int	size()
java.util.List<E>	subList(int fromIndex, int toIndex)
java.lang.Object[]	toArray()
<T> T[]	toArray(T[] a)

Methods inherited from class org.ujmp.core.genericmatrix.stub.AbstractDenseGenericMatrix2D

getDimensionCount, getObject, setObject

Methods inherited from class org.ujmp.core.genericmatrix.stub.AbstractDenseGenericMatrix

availableCoordinates, containsCoordinates, isSparse

Methods inherited from class org.ujmp.core.genericmatrix.stub.AbstractGenericMatrix

getAsObject, getObject, setAsObject, setObject

Methods inherited from class org.ujmp.core.AbstractMatrix

abs, addMissing, allCoordinates, allValues, and, and, append, appendHorizontally, appendVertically, atimes, bigDecimalValue, bigIntegerValue, booleanValue, bootstrap, bootstrap, ceil, center, charValue, chebyshevDistanceTo, chol, clone, compareTo, containsBigDecimal, containsBigInteger, containsBoolean, containsByte, containsChar, containsDate, containsDouble, containsFloat, containsInt, containsLong, containsMissingValues, containsNull, containsObject, containsShort, containsString, convert, convertEncoding, corrcoef, cos, cosh, cosineSimilarity, cosineSimilarityTo, countMissing, cov, cumprod, cumsum, dateValue, delete, delete, delete, deleteColumns, deleteColumns, deleteColumnsWithMissingValues, deleteRows, deleteRows, deleteRowsWithMissingValues, det, diag, diff, discretize, discretize, discretizeToBoolean, discretizeToColumns, divide, divide, divide, divide, doubleValue, eig, eigSymm, eq, eq, equals, equalsAnnotation, equalsContent, euklideanDistance, euklideanDistanceTo, exp, exportTo, extractAnnotation, eye, fadeIn, fadeOut, fill, fireValueChanged, fireValueChanged, fireValueChanged, flipdim, floatValue, floor, ge, ge, getAbsoluteValueMean, getAbsoluteValueSum, getAsBigDecimal, getAsBigInteger, getAsBoolean, getAsByte, getAsByteArray, getAsChar, getAsDate, getAsDouble, getAsFloat, getAsInt, getAsLong, getAsMatrix, getAsShort, getAsString, getColumnCount, getColumnForLabel, getColumnLabel, getColumnList, getCoordinatesOfMaximum, getCoordinatesOfMinimum, getCoreObjectId, getDescription, getDimensionLabel, getDimensionMetaData, getEuklideanValue, getFactory, getGUIObject, getId, getLabel, getLabelObject, getMaxValue, getMeanValue, getMetaData, getMetaData, getMetaDataDimensionMatrix, getMetaDataDouble, getMetaDataMatrix, getMetaDataString, getMinValue, getPositionForLabel, getPreferredObject, getRMS, getRowCount, getRowForLabel, getRowLabel, getRowList, getSize, getStdValue, getValueCount, getValueSum, getValueType, getZCount, ginv, grayScale, gt, gt, importFrom, impute, includeAnnotation, indexOfMax, indexOfMin, intValue, inv, invSPD, invSymm, isColumnVector, isDiagonal, isMultidimensionalMatrix, isReadOnly, isResizable, isRowVector, isScalar, isSingular, isSPD, isSquare, isSymmetric, isTransient, le, le, log, log10, log2, logistic, longValue, lowerCase, lt, lt, lu, manhattenDistance, manhattenDistanceTo, max, mean, min, minkowskiDistance, minkowskiDistanceTo, minus, minus, minus, minus, mtimes, mtimes, mutualInf, nans, ne, ne, nonZeroCoordinates, norm1, norm2, normalize, normF, normInf, not, ones, or, or, pairedTTest, pdet, pinv, pinv, plus, plus, plus, plus, power, power, princomp, prod, qr, rand, randn, rank, removePunctuation, removeWords, replace, replaceMissingBy, replaceRegex, replaceRegex, reshape, round, save, save, select, select, select, selectColumns, selectColumns, selectedCoordinates, selectedCoordinates, selectRows, selectRows, setAsBigDecimal, setAsBigInteger, setAsBoolean, setAsByte, setAsByteArray, setAsChar, setAsDate, setAsDouble, setAsFloat, setAsInt, setAsLong, setAsMatrix, setAsShort, setAsString, setColumnLabel, setContent, setDescription, setDimensionLabel, setDimensionMetaData, setId, setLabel, setMetaData, setMetaData, setMetaDataDimensionMatrix, setRowLabel, setSize, share, share, showGUI, shuffle, sign, sin, sinh, solve, solveSPD, solveSymm, sortrows, sqrt, squeeze, standardize, std, stem, stringValue, subMatrix, sum, svd, svd, swap, tan, tanh, tanh, tfIdf, times, times, times, times, toBigDecimalArray, toBigDecimalMatrix, toBigIntegerArray, toBigIntegerMatrix, toBooleanArray, toBooleanMatrix, toByteArray, toByteMatrix, toCharArray, toCharMatrix, toColumnVector, toDateArray, toDoubleArray, toDoubleMatrix, toFloatArray, toFloatMatrix, toHtml, toIntArray, toIntMatrix, toListMatrix, toLongArray, toLongMatrix, toMapMatrix, toObjectArray, toObjectMatrix, toRowVector, toSetMatrix, toShortArray, toShortMatrix, toString, toStringArray, toStringMatrix, trace, translate, transpose, transpose, transpose, tril, triu, unique, uniqueValueCount, upperCase, var, xor, xor, zeros

Methods inherited from class java.lang.Number

byteValue, shortValue

Methods inherited from class java.lang.Object

equals, getClass, hashCode, notify, notifyAll, wait, wait, wait

Methods inherited from interface org.ujmp.core.genericmatrix.GenericMatrix2D

getObject, setObject

Methods inherited from interface org.ujmp.core.Matrix

clone, exportTo, fireValueChanged, fireValueChanged, fireValueChanged, importFrom, save, save, share, share, toHtml

Methods inherited from interface org.ujmp.core.BaseMatrix

getFactory

Methods inherited from interface org.ujmp.core.interfaces.BaseMatrixProperties

allValues, equals, equalsAnnotation, equalsContent, getColumnCount, getColumnList, getDimensionCount, getRowCount, getRowList, getSize, getValueCount, getValueType, getZCount, isColumnVector, isDiagonal, isMultidimensionalMatrix, isReadOnly, isResizable, isRowVector, isScalar, isSingular, isSparse, isSquare, isSymmetric, isTransient, setSize, toString

Methods inherited from interface org.ujmp.core.interfaces.CoreObject

getCoreObjectId

Methods inherited from interface org.ujmp.core.interfaces.HasGUIObject

getGUIObject, showGUI

Methods inherited from interface org.ujmp.core.interfaces.CoordinateFunctions

allCoordinates, availableCoordinates, containsCoordinates, getCoordinatesOfMaximum, getCoordinatesOfMinimum, nonZeroCoordinates, selectedCoordinates, selectedCoordinates

Methods inherited from interface org.ujmp.core.interfaces.GettersAndSetters

getAsBigDecimal, getAsBigInteger, getAsBoolean, getAsByte, getAsByteArray, getAsChar, getAsDate, getAsDouble, getAsFloat, getAsInt, getAsLong, getAsMatrix, getAsObject, getAsShort, getAsString, getPreferredObject, setAsBigDecimal, setAsBigInteger, setAsBoolean, setAsByte, setAsByteArray, setAsChar, setAsDate, setAsDouble, setAsFloat, setAsInt, setAsLong, setAsMatrix, setAsObject, setAsShort, setAsString, toBigDecimalArray, toBigIntegerArray, toBooleanArray, toByteArray, toCharArray, toDateArray, toDoubleArray, toFloatArray, toIntArray, toLongArray, toObjectArray, toShortArray, toStringArray

Methods inherited from interface org.ujmp.core.doublematrix.calculation.basic.BasicDoubleCalculations

atimes, divide, divide, divide, divide, minus, minus, minus, minus, mtimes, mtimes, plus, plus, plus, plus, times, times, times, times

Methods inherited from interface org.ujmp.core.doublematrix.calculation.entrywise.basic.BasicEntrywiseDoubleCalculations

abs, exp, log, log10, log2, logistic, power, power, sign, sqrt

Methods inherited from interface org.ujmp.core.doublematrix.calculation.entrywise.rounding.RoundingDoubleCalculations

ceil, floor, round

Methods inherited from interface org.ujmp.core.doublematrix.calculation.entrywise.hyperbolic.HyperbolicDoubleCalculations

cosh, sinh, tanh, tanh

Methods inherited from interface org.ujmp.core.doublematrix.calculation.entrywise.trigonometric.TrigonometricDoubleCalculations

cos, sin, tan

Methods inherited from interface org.ujmp.core.doublematrix.calculation.entrywise.creators.CreatorDoubleCalculations

eye, nans, ones, rand, randn, zeros

Methods inherited from interface org.ujmp.core.doublematrix.calculation.entrywise.misc.MiscEntrywiseDoubleCalculations

grayScale

Methods inherited from interface org.ujmp.core.doublematrix.calculation.general.statistical.StatisticalDoubleCalculations

corrcoef, cov, cumprod, cumsum, diff, indexOfMax, indexOfMin, max, mean, min, mutualInf, pairedTTest, prod, std, sum, var

Methods inherited from interface org.ujmp.core.doublematrix.calculation.general.decomposition.DecompositionDoubleCalculations

chol, eig, eigSymm, ginv, inv, invSPD, invSymm, lu, pinv, pinv, princomp, qr, solve, solveSPD, solveSymm, svd, svd

Methods inherited from interface org.ujmp.core.doublematrix.calculation.general.missingvalues.MissingValueDoubleCalculations

addMissing, countMissing, deleteColumnsWithMissingValues, deleteRowsWithMissingValues, impute

Methods inherited from interface org.ujmp.core.doublematrix.calculation.general.misc.MiscGeneralDoubleCalculations

append, appendHorizontally, appendVertically, center, fadeIn, fadeOut, normalize, replaceMissingBy, standardize

Methods inherited from interface org.ujmp.core.doublematrix.calculation.general.discretize.DiscretizeCalculations

discretize, discretize, discretizeToBoolean, discretizeToColumns

Methods inherited from interface org.ujmp.core.booleanmatrix.calculation.BooleanCalculations

and, and, eq, eq, ge, ge, gt, gt, le, le, lt, lt, ne, ne, not, or, or, xor, xor

Methods inherited from interface org.ujmp.core.stringmatrix.calculation.StringCalculations

convertEncoding, lowerCase, removePunctuation, removeWords, replaceRegex, replaceRegex, stem, tfIdf, translate, upperCase

Methods inherited from interface org.ujmp.core.objectmatrix.calculation.ObjectCalculations

bootstrap, bootstrap, convert, delete, delete, delete, deleteColumns, deleteColumns, deleteRows, deleteRows, diag, extractAnnotation, fill, flipdim, includeAnnotation, replace, reshape, select, select, select, selectColumns, selectColumns, selectRows, selectRows, shuffle, sortrows, squeeze, subMatrix, swap, toColumnVector, toRowVector, transpose, transpose, transpose, tril, triu, unique, uniqueValueCount

Methods inherited from interface org.ujmp.core.interfaces.DistanceMeasures

chebyshevDistanceTo, cosineSimilarity, cosineSimilarityTo, euklideanDistance, euklideanDistanceTo, manhattenDistance, manhattenDistanceTo, minkowskiDistance, minkowskiDistanceTo

Methods inherited from interface java.lang.Comparable

compareTo

Methods inherited from interface org.ujmp.core.annotation.HasMetaData

getColumnForLabel, getColumnLabel, getDimensionLabel, getDimensionMetaData, getMetaData, getMetaData, getMetaDataDimensionMatrix, getMetaDataDouble, getMetaDataMatrix, getMetaDataString, getPositionForLabel, getRowForLabel, getRowLabel, setColumnLabel, setDimensionLabel, setDimensionMetaData, setMetaData, setMetaData, setMetaDataDimensionMatrix, setRowLabel

Methods inherited from interface org.ujmp.core.interfaces.HasLabel

getLabel, getLabelObject, setLabel

Methods inherited from interface org.ujmp.core.interfaces.HasDescription

getDescription, setDescription

Methods inherited from interface org.ujmp.core.interfaces.HasId

getId, setId

Methods inherited from interface org.ujmp.core.interfaces.Conversions

toBigDecimalMatrix, toBigIntegerMatrix, toBooleanMatrix, toByteMatrix, toCharMatrix, toDoubleMatrix, toFloatMatrix, toIntMatrix, toListMatrix, toLongMatrix, toMapMatrix, toObjectMatrix, toSetMatrix, toShortMatrix, toStringMatrix

Methods inherited from interface org.ujmp.core.interfaces.ExtendedMatrixProperties

bigDecimalValue, bigIntegerValue, booleanValue, byteValue, charValue, containsBigDecimal, containsBigInteger, containsBoolean, containsByte, containsChar, containsDate, containsDouble, containsFloat, containsInt, containsLong, containsMissingValues, containsNull, containsObject, containsShort, containsString, dateValue, det, doubleValue, floatValue, getAbsoluteValueMean, getAbsoluteValueSum, getEuklideanValue, getMaxValue, getMeanValue, getMinValue, getRMS, getStdValue, getValueSum, intValue, isSPD, longValue, norm1, norm2, normF, normInf, pdet, rank, setContent, shortValue, stringValue, trace

Methods inherited from interface java.util.List

equals, hashCode, replaceAll, sort, spliterator

Methods inherited from interface java.util.Collection

parallelStream, removeIf, stream

Methods inherited from interface java.lang.Iterable

forEach

Constructor Detail

AbstractListMatrix

public AbstractListMatrix()

Method Detail

get

public abstract E get(int index)

Specified by:

get in interface java.util.List<E>

add

public final boolean add(E t)

Specified by:

add in interface java.util.Collection<E>

Specified by:

add in interface java.util.List<E>

getObject

public final E getObject(long row,
                         long column)

Specified by:

getObject in interface GenericMatrix2D<E>

Specified by:

getObject in class AbstractDenseGenericMatrix2D<E>

setObject

public final void setObject(E value,
                            long row,
                            long column)

Specified by:

setObject in interface GenericMatrix2D<E>

Specified by:

setObject in class AbstractDenseGenericMatrix2D<E>

add

public void add(int index,
                E element)

Specified by:

add in interface java.util.List<E>

remove

public final E remove(int index)

Specified by:

remove in interface java.util.List<E>

remove

public final boolean remove(java.lang.Object o)

Specified by:

remove in interface java.util.Collection<E>

Specified by:

remove in interface java.util.List<E>

set

public final E set(int index,
                   E element)

Specified by:

set in interface java.util.List<E>

clear

public final void clear()

Specified by:

clear in interface java.util.Collection<E>

Specified by:

clear in interface java.util.List<E>

Specified by:

clear in interface Clearable

Overrides:

clear in class AbstractDenseGenericMatrix<E>

size

public abstract int size()

Specified by:

size in interface java.util.Collection<E>

Specified by:

size in interface java.util.List<E>

getSize

public final long[] getSize()

Specified by:

getSize in interface BaseMatrixProperties

Overrides:

getSize in class AbstractMatrix

contains

public final boolean contains(java.lang.Object o)

Specified by:

contains in interface java.util.Collection<E>

Specified by:

contains in interface java.util.List<E>

containsAll

public final boolean containsAll(java.util.Collection<?> c)

Specified by:

containsAll in interface java.util.Collection<E>

Specified by:

containsAll in interface java.util.List<E>

indexOf

public final int indexOf(java.lang.Object o)

Specified by:

indexOf in interface java.util.List<E>

isEmpty

public final boolean isEmpty()

Specified by:

isEmpty in interface java.util.Collection<E>

Specified by:

isEmpty in interface java.util.List<E>

Specified by:

isEmpty in interface BaseMatrixProperties

Overrides:

isEmpty in class AbstractMatrix

lastIndexOf

public final int lastIndexOf(java.lang.Object o)

Specified by:

lastIndexOf in interface java.util.List<E>

removeAll

public final boolean removeAll(java.util.Collection<?> c)

Specified by:

removeAll in interface java.util.Collection<E>

Specified by:

removeAll in interface java.util.List<E>

iterator

public java.util.Iterator<E> iterator()

Specified by:

iterator in interface java.lang.Iterable<E>

Specified by:

iterator in interface java.util.Collection<E>

Specified by:

iterator in interface java.util.List<E>

toArray

public final java.lang.Object[] toArray()

Specified by:

toArray in interface java.util.Collection<E>

Specified by:

toArray in interface java.util.List<E>

toArray

public final <T> T[] toArray(T[] a)

Specified by:

toArray in interface java.util.Collection<E>

Specified by:

toArray in interface java.util.List<E>

addAll

public boolean addAll(java.util.Collection<? extends E> c)

Specified by:

addAll in interface java.util.Collection<E>

Specified by:

addAll in interface java.util.List<E>

addAll

public boolean addAll(int index,
                      java.util.Collection<? extends E> c)

Specified by:

addAll in interface java.util.List<E>

retainAll

public final boolean retainAll(java.util.Collection<?> c)

Specified by:

retainAll in interface java.util.Collection<E>

Specified by:

retainAll in interface java.util.List<E>

listIterator

public java.util.ListIterator<E> listIterator()

Specified by:

listIterator in interface java.util.List<E>

listIterator

public java.util.ListIterator<E> listIterator(int index)

Specified by:

listIterator in interface java.util.List<E>

subList

public java.util.List<E> subList(int fromIndex,
                                 int toIndex)

Specified by:

subList in interface java.util.List<E>

getLast

public final E getLast()

Specified by:

getLast in interface ListMatrix<E>