org.ujmp.core.graphmatrix

Interface GraphMatrix<N,E>

All Superinterfaces:

BaseGenericMatrix<E>, BaseMatrix, BaseMatrixProperties, BasicDoubleCalculations, BasicEntrywiseDoubleCalculations, BooleanCalculations, CanPerformCalculations, Clearable, java.lang.Cloneable, java.lang.Comparable<Matrix>, Conversions, CoordinateFunctions, CoreObject, CreatorDoubleCalculations, DecompositionDoubleCalculations, DiscretizeCalculations, DistanceMeasures, DoubleCalculations, EntrywiseDoubleCalculations, ExtendedMatrixProperties, GeneralDoubleCalculations, GenericMatrix2D<E>, GettersAndSetters, HasDescription, HasGUIObject, HasId, HasLabel, HasMetaData, HyperbolicDoubleCalculations, IntCalculations, Matrix, Matrix2D, MiscEntrywiseDoubleCalculations, MiscGeneralDoubleCalculations, MissingValueDoubleCalculations, ObjectCalculations, RoundingDoubleCalculations, java.io.Serializable, StatisticalDoubleCalculations, StringCalculations, TrigonometricDoubleCalculations

All Known Implementing Classes:

AbstractGraphMatrix, DefaultGraphMatrix

public interface GraphMatrix<N,E>
extends GenericMatrix2D<E>

Field Summary

Fields inherited from interface org.ujmp.core.Matrix

chol, divideMatrix, divideScalar, eig, Factory, inv, lu, minusMatrix, minusScalar, mtimes, plusMatrix, plusScalar, qr, solve, svd, timesMatrix, timesScalar, transpose

Fields inherited from interface org.ujmp.core.BaseMatrix

ALL, COLUMN, LINK, NEW, NONE, ORIG, ROW, X, Y, Z

Fields inherited from interface org.ujmp.core.annotation.HasMetaData

DIMENSIONMETADATA

Fields inherited from interface org.ujmp.core.interfaces.HasLabel

LABEL

Fields inherited from interface org.ujmp.core.interfaces.HasDescription

DESCRIPTION

Fields inherited from interface org.ujmp.core.interfaces.HasId

ID

Method Summary

Modifier and Type	Method and Description
void	addNode(N node)
int	getChildCount(long nodeIndex)
int	getChildCount(N node)
java.util.List<java.lang.Long>	getChildIndices(long nodeIndex)
java.util.List<java.lang.Long>	getChildIndices(N node)
java.util.List<N>	getChildren(long nodeIndex)
java.util.List<N>	getChildren(N node)
int	getDegree(long nodeIndex)
int	getDegree(N node)
E	getEdge(long nodeIndex1, long nodeIndex2)
E	getEdge(N node1, N node2)
int	getEdgeCount()
long	getIndexOfNode(N node)
N	getNode(long index)
int	getNodeCount()
java.util.List<N>	getNodeList()
int	getParentCount(long nodeIndex)
int	getParentCount(N node)
java.util.List<java.lang.Long>	getParentIndices(long nodeIndex)
java.util.List<java.lang.Long>	getParentIndices(N node)
java.util.List<N>	getParents(long nodeIndex)
java.util.List<N>	getParents(N node)
boolean	isConnected(long nodeIndex1, long nodeIndex2)
boolean	isConnected(N node1, N node2)
boolean	isDirected()
void	removeEdge(long nodeIndex1, long nodeIndex2)
void	removeEdge(N node1, N node2)
void	removeNode(long node)
void	removeNode(N node)
void	setDirected(boolean directed)
void	setEdge(E edge, long nodeIndex1, long nodeIndex2)
void	setEdge(E edge, N node1, N node2)
void	setNode(N node, long index)

Methods inherited from interface org.ujmp.core.genericmatrix.GenericMatrix2D

getObject, getObject, setObject, setObject

Methods inherited from interface org.ujmp.core.Matrix

clone, exportTo, fireValueChanged, fireValueChanged, fireValueChanged, importFrom, save, save, share, share, toHtml

Methods inherited from interface org.ujmp.core.BaseMatrix

getFactory

Methods inherited from interface org.ujmp.core.interfaces.BaseMatrixProperties

allValues, equals, equalsAnnotation, equalsContent, getColumnCount, getColumnList, getDimensionCount, getRowCount, getRowList, getSize, getSize, getValueCount, getValueType, getZCount, isColumnVector, isDiagonal, isEmpty, isMultidimensionalMatrix, isReadOnly, isResizable, isRowVector, isScalar, isSingular, isSparse, isSquare, isSymmetric, isTransient, setSize, toString

Methods inherited from interface org.ujmp.core.interfaces.CoreObject

getCoreObjectId

Methods inherited from interface org.ujmp.core.interfaces.Clearable

clear

Methods inherited from interface org.ujmp.core.interfaces.HasGUIObject

getGUIObject, showGUI

Methods inherited from interface org.ujmp.core.interfaces.CoordinateFunctions

allCoordinates, availableCoordinates, containsCoordinates, getCoordinatesOfMaximum, getCoordinatesOfMinimum, nonZeroCoordinates, selectedCoordinates, selectedCoordinates

Methods inherited from interface org.ujmp.core.interfaces.GettersAndSetters

getAsBigDecimal, getAsBigInteger, getAsBoolean, getAsByte, getAsByteArray, getAsChar, getAsDate, getAsDouble, getAsFloat, getAsInt, getAsLong, getAsMatrix, getAsObject, getAsShort, getAsString, getPreferredObject, setAsBigDecimal, setAsBigInteger, setAsBoolean, setAsByte, setAsByteArray, setAsChar, setAsDate, setAsDouble, setAsFloat, setAsInt, setAsLong, setAsMatrix, setAsObject, setAsShort, setAsString, toBigDecimalArray, toBigIntegerArray, toBooleanArray, toByteArray, toCharArray, toDateArray, toDoubleArray, toFloatArray, toIntArray, toLongArray, toObjectArray, toShortArray, toStringArray

Methods inherited from interface org.ujmp.core.doublematrix.calculation.basic.BasicDoubleCalculations

atimes, divide, divide, divide, divide, minus, minus, minus, minus, mtimes, mtimes, plus, plus, plus, plus, times, times, times, times

Methods inherited from interface org.ujmp.core.doublematrix.calculation.entrywise.basic.BasicEntrywiseDoubleCalculations

abs, exp, log, log10, log2, logistic, power, power, sign, sqrt

Methods inherited from interface org.ujmp.core.doublematrix.calculation.entrywise.rounding.RoundingDoubleCalculations

ceil, floor, round

Methods inherited from interface org.ujmp.core.doublematrix.calculation.entrywise.hyperbolic.HyperbolicDoubleCalculations

cosh, sinh, tanh, tanh

Methods inherited from interface org.ujmp.core.doublematrix.calculation.entrywise.trigonometric.TrigonometricDoubleCalculations

cos, sin, tan

Methods inherited from interface org.ujmp.core.doublematrix.calculation.entrywise.creators.CreatorDoubleCalculations

eye, nans, ones, rand, randn, zeros

Methods inherited from interface org.ujmp.core.doublematrix.calculation.entrywise.misc.MiscEntrywiseDoubleCalculations

grayScale

Methods inherited from interface org.ujmp.core.doublematrix.calculation.general.statistical.StatisticalDoubleCalculations

corrcoef, cov, cumprod, cumsum, diff, indexOfMax, indexOfMin, max, mean, min, mutualInf, pairedTTest, prod, std, sum, var

Methods inherited from interface org.ujmp.core.doublematrix.calculation.general.decomposition.DecompositionDoubleCalculations

chol, eig, eigSymm, ginv, inv, invSPD, invSymm, lu, pinv, pinv, princomp, qr, solve, solveSPD, solveSymm, svd, svd

Methods inherited from interface org.ujmp.core.doublematrix.calculation.general.missingvalues.MissingValueDoubleCalculations

addMissing, countMissing, deleteColumnsWithMissingValues, deleteRowsWithMissingValues, impute

Methods inherited from interface org.ujmp.core.doublematrix.calculation.general.misc.MiscGeneralDoubleCalculations

append, appendHorizontally, appendVertically, center, fadeIn, fadeOut, normalize, replaceMissingBy, standardize

Methods inherited from interface org.ujmp.core.doublematrix.calculation.general.discretize.DiscretizeCalculations

discretize, discretize, discretizeToBoolean, discretizeToColumns

Methods inherited from interface org.ujmp.core.booleanmatrix.calculation.BooleanCalculations

and, and, eq, eq, ge, ge, gt, gt, le, le, lt, lt, ne, ne, not, or, or, xor, xor

Methods inherited from interface org.ujmp.core.stringmatrix.calculation.StringCalculations

convertEncoding, lowerCase, removePunctuation, removeWords, replaceRegex, replaceRegex, stem, tfIdf, translate, upperCase

Methods inherited from interface org.ujmp.core.objectmatrix.calculation.ObjectCalculations

bootstrap, bootstrap, convert, delete, delete, delete, deleteColumns, deleteColumns, deleteRows, deleteRows, diag, extractAnnotation, fill, flipdim, includeAnnotation, replace, reshape, select, select, select, selectColumns, selectColumns, selectRows, selectRows, shuffle, sortrows, squeeze, subMatrix, swap, toColumnVector, toRowVector, transpose, transpose, transpose, tril, triu, unique, uniqueValueCount

Methods inherited from interface org.ujmp.core.interfaces.DistanceMeasures

chebyshevDistanceTo, cosineSimilarity, cosineSimilarityTo, euklideanDistance, euklideanDistanceTo, manhattenDistance, manhattenDistanceTo, minkowskiDistance, minkowskiDistanceTo

Methods inherited from interface java.lang.Comparable

compareTo

Methods inherited from interface org.ujmp.core.annotation.HasMetaData

getColumnForLabel, getColumnLabel, getDimensionLabel, getDimensionMetaData, getMetaData, getMetaData, getMetaDataDimensionMatrix, getMetaDataDouble, getMetaDataMatrix, getMetaDataString, getPositionForLabel, getRowForLabel, getRowLabel, setColumnLabel, setDimensionLabel, setDimensionMetaData, setMetaData, setMetaData, setMetaDataDimensionMatrix, setRowLabel

Methods inherited from interface org.ujmp.core.interfaces.HasLabel

getLabel, getLabelObject, setLabel

Methods inherited from interface org.ujmp.core.interfaces.HasDescription

getDescription, setDescription

Methods inherited from interface org.ujmp.core.interfaces.HasId

getId, setId

Methods inherited from interface org.ujmp.core.interfaces.Conversions

toBigDecimalMatrix, toBigIntegerMatrix, toBooleanMatrix, toByteMatrix, toCharMatrix, toDoubleMatrix, toFloatMatrix, toIntMatrix, toListMatrix, toLongMatrix, toMapMatrix, toObjectMatrix, toSetMatrix, toShortMatrix, toStringMatrix

Methods inherited from interface org.ujmp.core.interfaces.ExtendedMatrixProperties

bigDecimalValue, bigIntegerValue, booleanValue, byteValue, charValue, containsBigDecimal, containsBigInteger, containsBoolean, containsByte, containsChar, containsDate, containsDouble, containsFloat, containsInt, containsLong, containsMissingValues, containsNull, containsObject, containsShort, containsString, dateValue, det, doubleValue, floatValue, getAbsoluteValueMean, getAbsoluteValueSum, getEuklideanValue, getMaxValue, getMeanValue, getMinValue, getRMS, getStdValue, getValueSum, intValue, isSPD, longValue, norm1, norm2, normF, normInf, pdet, rank, setContent, shortValue, stringValue, trace

Method Detail

getNodeList

java.util.List<N> getNodeList()

isDirected

boolean isDirected()

setDirected

void setDirected(boolean directed)

getEdge

E getEdge(long nodeIndex1,
          long nodeIndex2)

getEdge

E getEdge(N node1,
          N node2)

setEdge

void setEdge(E edge,
             long nodeIndex1,
             long nodeIndex2)

setEdge

void setEdge(E edge,
             N node1,
             N node2)

getNode

N getNode(long index)

addNode

void addNode(N node)

setNode

void setNode(N node,
             long index)

removeNode

void removeNode(N node)

removeNode

void removeNode(long node)

isConnected

boolean isConnected(long nodeIndex1,
                    long nodeIndex2)

isConnected

boolean isConnected(N node1,
                    N node2)

getIndexOfNode

long getIndexOfNode(N node)

getEdgeCount

int getEdgeCount()

getNodeCount

int getNodeCount()

getChildCount

int getChildCount(long nodeIndex)

getChildCount

int getChildCount(N node)

getParentCount

int getParentCount(long nodeIndex)

getParentCount

int getParentCount(N node)

getDegree

int getDegree(long nodeIndex)

getDegree

int getDegree(N node)

getChildren

java.util.List<N> getChildren(long nodeIndex)

getChildren

java.util.List<N> getChildren(N node)

getChildIndices

java.util.List<java.lang.Long> getChildIndices(long nodeIndex)

getChildIndices

java.util.List<java.lang.Long> getChildIndices(N node)

getParents

java.util.List<N> getParents(long nodeIndex)

getParents

java.util.List<N> getParents(N node)

getParentIndices

java.util.List<java.lang.Long> getParentIndices(long nodeIndex)

getParentIndices

java.util.List<java.lang.Long> getParentIndices(N node)

removeEdge

void removeEdge(N node1,
                N node2)

removeEdge

void removeEdge(long nodeIndex1,
                long nodeIndex2)