org.ujmp.core.doublematrix.stub
Class AbstractDenseDoubleMatrix2D
- java.lang.Object
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- java.lang.Number
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- org.ujmp.core.AbstractMatrix
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- org.ujmp.core.genericmatrix.stub.AbstractGenericMatrix<T>
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- org.ujmp.core.numbermatrix.stub.AbstractNumberMatrix<java.lang.Double>
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- org.ujmp.core.doublematrix.stub.AbstractDoubleMatrix
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- org.ujmp.core.doublematrix.stub.AbstractDoubleMatrix2D
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- org.ujmp.core.doublematrix.stub.AbstractDenseDoubleMatrix2D
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- All Implemented Interfaces:
- java.io.Serializable, java.lang.Cloneable, java.lang.Comparable<Matrix>, HasMetaData, BaseMatrix, BooleanCalculations, CanPerformCalculations, DenseMatrix, DenseMatrix2D, DenseMatrixMultiD, BaseDoubleMatrix, BasicDoubleCalculations, DoubleCalculations, BasicEntrywiseDoubleCalculations, CreatorDoubleCalculations, EntrywiseDoubleCalculations, HyperbolicDoubleCalculations, MiscEntrywiseDoubleCalculations, RoundingDoubleCalculations, TrigonometricDoubleCalculations, DecompositionDoubleCalculations, DiscretizeCalculations, GeneralDoubleCalculations, MiscGeneralDoubleCalculations, MissingValueDoubleCalculations, StatisticalDoubleCalculations, DenseDoubleMatrix, DenseDoubleMatrix2D, DenseDoubleMatrixMultiD, DoubleMatrix, DoubleMatrix2D, DoubleMatrixMultiD, SparseDoubleMatrix, SparseDoubleMatrix2D, SparseDoubleMatrixMultiD, BaseGenericMatrix<java.lang.Double>, DenseGenericMatrix<java.lang.Double>, DenseGenericMatrix2D<java.lang.Double>, DenseGenericMatrixMultiD<java.lang.Double>, GenericMatrix<java.lang.Double>, GenericMatrix2D<java.lang.Double>, GenericMatrixMultiD<java.lang.Double>, SparseGenericMatrix<java.lang.Double>, SparseGenericMatrix2D<java.lang.Double>, SparseGenericMatrixMultiD<java.lang.Double>, BaseMatrixProperties, Clearable, Conversions, CoordinateFunctions, CoreObject, DistanceMeasures, ExtendedMatrixProperties, GettersAndSetters, HasDescription, HasGUIObject, HasId, HasLabel, IntCalculations, Matrix, Matrix2D, MatrixMultiD, BaseNumberMatrix<java.lang.Double>, DenseNumberMatrix<java.lang.Double>, DenseNumberMatrix2D<java.lang.Double>, DenseNumberMatrixMultiD<java.lang.Double>, NumberMatrix<java.lang.Double>, NumberMatrix2D<java.lang.Double>, NumberMatrixMultiD<java.lang.Double>, SparseNumberMatrix<java.lang.Double>, SparseNumberMatrix2D<java.lang.Double>, SparseNumberMatrixMultiD<java.lang.Double>, ObjectCalculations, SparseMatrix, SparseMatrix2D, SparseMatrixMultiD, StringCalculations
- Direct Known Subclasses:
- ArrayDenseDoubleMatrix2D, BlockDenseDoubleMatrix2D, ClientMatrix, DefaultDenseDoubleMatrix2D, MandelbrotMatrix, MortonDenseDoubleMartrix2D, TimeSeriesMatrix
public abstract class AbstractDenseDoubleMatrix2D extends AbstractDoubleMatrix2D implements DenseDoubleMatrix2D
- See Also:
- Serialized Form
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Field Summary
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Fields inherited from interface org.ujmp.core.doublematrix.DenseDoubleMatrix2D
Factory
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Fields inherited from interface org.ujmp.core.Matrix
chol, divideMatrix, divideScalar, eig, inv, lu, minusMatrix, minusScalar, mtimes, plusMatrix, plusScalar, qr, solve, svd, timesMatrix, timesScalar, transpose
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Fields inherited from interface org.ujmp.core.BaseMatrix
ALL, COLUMN, LINK, NEW, NONE, ORIG, ROW, X, Y, Z
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Fields inherited from interface org.ujmp.core.annotation.HasMetaData
DIMENSIONMETADATA
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Fields inherited from interface org.ujmp.core.interfaces.HasDescription
DESCRIPTION
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Fields inherited from interface org.ujmp.core.doublematrix.DoubleMatrix
Factory
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Constructor Summary
Constructors Constructor and Description AbstractDenseDoubleMatrix2D(long rows, long columns)
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Method Summary
All Methods Instance Methods Concrete Methods Modifier and Type Method and Description java.lang.Iterable<long[]>availableCoordinates()Returns an Iterator that only goes over the coordinates in the Matrix that are stored.voidclear()booleancontainsCoordinates(long... coordinates)Determines if the given Coordinates are part of the Matrix.Matrixdivide(double v)Divides every entry in the matrix by a scalar.Matrixdivide(Matrix m2)Calculates an entrywise division of the two matrices.doublegetAsDouble(int row, int column)doublegetAsDouble(long row, long column)intgetDimensionCount()java.lang.DoublegetObject(int row, int column)java.lang.DoublegetObject(long row, long column)booleanisSparse()Matrixminus(double v)Subtracts a specified value from all entries in the matrix.Matrixminus(Matrix m2)Calculates the difference of the entries in both matricesMatrixmtimes(Matrix m2)Performs a matrix multiplication on the two matrices.Matrixplus(double v)Adds a specified value to all entries in the matrix.Matrixplus(Matrix m2)Calculates the sum of the entries in both matricesvoidsetAsDouble(double value, int row, int column)voidsetAsDouble(double value, long row, long column)voidsetObject(java.lang.Double o, int row, int column)voidsetObject(java.lang.Double o, long row, long column)Matrixtimes(double v)Multiplies every entry in the matrix with a scalar.Matrixtimes(Matrix m2)Calculates the entrywise product of the two matrices.Matrixtranspose()Returns the transpose of the Matrix, where rows and columns are exchanged.-
Methods inherited from class org.ujmp.core.doublematrix.stub.AbstractDoubleMatrix2D
getDouble, setDouble
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Methods inherited from class org.ujmp.core.doublematrix.stub.AbstractDoubleMatrix
getAsDouble, getNumber, getObject, getValueType, setAsDouble, setNumber, setObject
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Methods inherited from class org.ujmp.core.genericmatrix.stub.AbstractGenericMatrix
getAsObject, setAsObject
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Methods inherited from class org.ujmp.core.AbstractMatrix
abs, addMissing, allCoordinates, allValues, and, and, append, appendHorizontally, appendVertically, atimes, bigDecimalValue, bigIntegerValue, booleanValue, bootstrap, bootstrap, ceil, center, charValue, chebyshevDistanceTo, chol, clone, compareTo, containsBigDecimal, containsBigInteger, containsBoolean, containsByte, containsChar, containsDate, containsDouble, containsFloat, containsInt, containsLong, containsMissingValues, containsNull, containsObject, containsShort, containsString, convert, convertEncoding, corrcoef, cos, cosh, cosineSimilarity, cosineSimilarityTo, countMissing, cov, cumprod, cumsum, dateValue, delete, delete, delete, deleteColumns, deleteColumns, deleteColumnsWithMissingValues, deleteRows, deleteRows, deleteRowsWithMissingValues, det, diag, diff, discretize, discretize, discretizeToBoolean, discretizeToColumns, divide, divide, doubleValue, eig, eigSymm, eq, eq, equals, equalsAnnotation, equalsContent, euklideanDistance, euklideanDistanceTo, exp, exportTo, extractAnnotation, eye, fadeIn, fadeOut, fill, fireValueChanged, fireValueChanged, fireValueChanged, flipdim, floatValue, floor, ge, ge, getAbsoluteValueMean, getAbsoluteValueSum, getAsBigDecimal, getAsBigInteger, getAsBoolean, getAsByte, getAsByteArray, getAsChar, getAsDate, getAsFloat, getAsInt, getAsLong, getAsMatrix, getAsShort, getAsString, getColumnCount, getColumnForLabel, getColumnLabel, getColumnList, getCoordinatesOfMaximum, getCoordinatesOfMinimum, getCoreObjectId, getDescription, getDimensionLabel, getDimensionMetaData, getEuklideanValue, getFactory, getGUIObject, getId, getLabel, getLabelObject, getMaxValue, getMeanValue, getMetaData, getMetaData, getMetaDataDimensionMatrix, getMetaDataDouble, getMetaDataMatrix, getMetaDataString, getMinValue, getPositionForLabel, getPreferredObject, getRMS, getRowCount, getRowForLabel, getRowLabel, getRowList, getSize, getSize, getStdValue, getValueCount, getValueSum, getZCount, ginv, grayScale, gt, gt, importFrom, impute, includeAnnotation, indexOfMax, indexOfMin, intValue, inv, invSPD, invSymm, isColumnVector, isDiagonal, isEmpty, isMultidimensionalMatrix, isReadOnly, isResizable, isRowVector, isScalar, isSingular, isSPD, isSquare, isSymmetric, isTransient, le, le, log, log10, log2, logistic, longValue, lowerCase, lt, lt, lu, manhattenDistance, manhattenDistanceTo, max, mean, min, minkowskiDistance, minkowskiDistanceTo, minus, minus, mtimes, mutualInf, nans, ne, ne, nonZeroCoordinates, norm1, norm2, normalize, normF, normInf, not, ones, or, or, pairedTTest, pdet, pinv, pinv, plus, plus, power, power, princomp, prod, qr, rand, randn, rank, removePunctuation, removeWords, replace, replaceMissingBy, replaceRegex, replaceRegex, reshape, round, save, save, select, select, select, selectColumns, selectColumns, selectedCoordinates, selectedCoordinates, selectRows, selectRows, setAsBigDecimal, setAsBigInteger, setAsBoolean, setAsByte, setAsByteArray, setAsChar, setAsDate, setAsFloat, setAsInt, setAsLong, setAsMatrix, setAsShort, setAsString, setColumnLabel, setContent, setDescription, setDimensionLabel, setDimensionMetaData, setId, setLabel, setMetaData, setMetaData, setMetaDataDimensionMatrix, setRowLabel, setSize, share, share, showGUI, shuffle, sign, sin, sinh, solve, solveSPD, solveSymm, sortrows, sqrt, squeeze, standardize, std, stem, stringValue, subMatrix, sum, svd, svd, swap, tan, tanh, tanh, tfIdf, times, times, toBigDecimalArray, toBigDecimalMatrix, toBigIntegerArray, toBigIntegerMatrix, toBooleanArray, toBooleanMatrix, toByteArray, toByteMatrix, toCharArray, toCharMatrix, toColumnVector, toDateArray, toDoubleArray, toDoubleMatrix, toFloatArray, toFloatMatrix, toHtml, toIntArray, toIntMatrix, toListMatrix, toLongArray, toLongMatrix, toMapMatrix, toObjectArray, toObjectMatrix, toRowVector, toSetMatrix, toShortArray, toShortMatrix, toString, toStringArray, toStringMatrix, trace, translate, transpose, transpose, tril, triu, unique, uniqueValueCount, upperCase, var, xor, xor, zeros
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Methods inherited from class java.lang.Object
getClass, hashCode, notify, notifyAll, wait, wait, wait
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Methods inherited from interface org.ujmp.core.doublematrix.DoubleMatrix2D
getDouble, getDouble, setDouble, setDouble
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Methods inherited from interface org.ujmp.core.Matrix
clone, exportTo, fireValueChanged, fireValueChanged, fireValueChanged, importFrom, save, save, share, share, toHtml
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Methods inherited from interface org.ujmp.core.BaseMatrix
getFactory
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Methods inherited from interface org.ujmp.core.interfaces.BaseMatrixProperties
allValues, equals, equalsAnnotation, equalsContent, getColumnCount, getColumnList, getRowCount, getRowList, getSize, getSize, getValueCount, getValueType, getZCount, isColumnVector, isDiagonal, isEmpty, isMultidimensionalMatrix, isReadOnly, isResizable, isRowVector, isScalar, isSingular, isSquare, isSymmetric, isTransient, setSize, toString
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Methods inherited from interface org.ujmp.core.interfaces.CoreObject
getCoreObjectId
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Methods inherited from interface org.ujmp.core.interfaces.HasGUIObject
getGUIObject, showGUI
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Methods inherited from interface org.ujmp.core.interfaces.CoordinateFunctions
allCoordinates, getCoordinatesOfMaximum, getCoordinatesOfMinimum, nonZeroCoordinates, selectedCoordinates, selectedCoordinates
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Methods inherited from interface org.ujmp.core.interfaces.GettersAndSetters
getAsBigDecimal, getAsBigInteger, getAsBoolean, getAsByte, getAsByteArray, getAsChar, getAsDate, getAsDouble, getAsFloat, getAsInt, getAsLong, getAsMatrix, getAsObject, getAsShort, getAsString, getPreferredObject, setAsBigDecimal, setAsBigInteger, setAsBoolean, setAsByte, setAsByteArray, setAsChar, setAsDate, setAsDouble, setAsFloat, setAsInt, setAsLong, setAsMatrix, setAsObject, setAsShort, setAsString, toBigDecimalArray, toBigIntegerArray, toBooleanArray, toByteArray, toCharArray, toDateArray, toDoubleArray, toFloatArray, toIntArray, toLongArray, toObjectArray, toShortArray, toStringArray
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Methods inherited from interface org.ujmp.core.doublematrix.calculation.basic.BasicDoubleCalculations
atimes, divide, divide, minus, minus, mtimes, plus, plus, times, times
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Methods inherited from interface org.ujmp.core.doublematrix.calculation.entrywise.basic.BasicEntrywiseDoubleCalculations
abs, exp, log, log10, log2, logistic, power, power, sign, sqrt
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Methods inherited from interface org.ujmp.core.doublematrix.calculation.entrywise.rounding.RoundingDoubleCalculations
ceil, floor, round
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Methods inherited from interface org.ujmp.core.doublematrix.calculation.entrywise.hyperbolic.HyperbolicDoubleCalculations
cosh, sinh, tanh, tanh
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Methods inherited from interface org.ujmp.core.doublematrix.calculation.entrywise.trigonometric.TrigonometricDoubleCalculations
cos, sin, tan
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Methods inherited from interface org.ujmp.core.doublematrix.calculation.entrywise.creators.CreatorDoubleCalculations
eye, nans, ones, rand, randn, zeros
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Methods inherited from interface org.ujmp.core.doublematrix.calculation.entrywise.misc.MiscEntrywiseDoubleCalculations
grayScale
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Methods inherited from interface org.ujmp.core.doublematrix.calculation.general.statistical.StatisticalDoubleCalculations
corrcoef, cov, cumprod, cumsum, diff, indexOfMax, indexOfMin, max, mean, min, mutualInf, pairedTTest, prod, std, sum, var
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Methods inherited from interface org.ujmp.core.doublematrix.calculation.general.decomposition.DecompositionDoubleCalculations
chol, eig, eigSymm, ginv, inv, invSPD, invSymm, lu, pinv, pinv, princomp, qr, solve, solveSPD, solveSymm, svd, svd
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Methods inherited from interface org.ujmp.core.doublematrix.calculation.general.missingvalues.MissingValueDoubleCalculations
addMissing, countMissing, deleteColumnsWithMissingValues, deleteRowsWithMissingValues, impute
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Methods inherited from interface org.ujmp.core.doublematrix.calculation.general.misc.MiscGeneralDoubleCalculations
append, appendHorizontally, appendVertically, center, fadeIn, fadeOut, normalize, replaceMissingBy, standardize
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Methods inherited from interface org.ujmp.core.doublematrix.calculation.general.discretize.DiscretizeCalculations
discretize, discretize, discretizeToBoolean, discretizeToColumns
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Methods inherited from interface org.ujmp.core.booleanmatrix.calculation.BooleanCalculations
and, and, eq, eq, ge, ge, gt, gt, le, le, lt, lt, ne, ne, not, or, or, xor, xor
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Methods inherited from interface org.ujmp.core.stringmatrix.calculation.StringCalculations
convertEncoding, lowerCase, removePunctuation, removeWords, replaceRegex, replaceRegex, stem, tfIdf, translate, upperCase
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Methods inherited from interface org.ujmp.core.objectmatrix.calculation.ObjectCalculations
bootstrap, bootstrap, convert, delete, delete, delete, deleteColumns, deleteColumns, deleteRows, deleteRows, diag, extractAnnotation, fill, flipdim, includeAnnotation, replace, reshape, select, select, select, selectColumns, selectColumns, selectRows, selectRows, shuffle, sortrows, squeeze, subMatrix, swap, toColumnVector, toRowVector, transpose, transpose, tril, triu, unique, uniqueValueCount
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Methods inherited from interface org.ujmp.core.interfaces.DistanceMeasures
chebyshevDistanceTo, cosineSimilarity, cosineSimilarityTo, euklideanDistance, euklideanDistanceTo, manhattenDistance, manhattenDistanceTo, minkowskiDistance, minkowskiDistanceTo
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Methods inherited from interface org.ujmp.core.annotation.HasMetaData
getColumnForLabel, getColumnLabel, getDimensionLabel, getDimensionMetaData, getMetaData, getMetaData, getMetaDataDimensionMatrix, getMetaDataDouble, getMetaDataMatrix, getMetaDataString, getPositionForLabel, getRowForLabel, getRowLabel, setColumnLabel, setDimensionLabel, setDimensionMetaData, setMetaData, setMetaData, setMetaDataDimensionMatrix, setRowLabel
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Methods inherited from interface org.ujmp.core.interfaces.HasLabel
getLabel, getLabelObject, setLabel
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Methods inherited from interface org.ujmp.core.interfaces.HasDescription
getDescription, setDescription
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Methods inherited from interface org.ujmp.core.interfaces.Conversions
toBigDecimalMatrix, toBigIntegerMatrix, toBooleanMatrix, toByteMatrix, toCharMatrix, toDoubleMatrix, toFloatMatrix, toIntMatrix, toListMatrix, toLongMatrix, toMapMatrix, toObjectMatrix, toSetMatrix, toShortMatrix, toStringMatrix
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Methods inherited from interface org.ujmp.core.interfaces.ExtendedMatrixProperties
bigDecimalValue, bigIntegerValue, booleanValue, byteValue, charValue, containsBigDecimal, containsBigInteger, containsBoolean, containsByte, containsChar, containsDate, containsDouble, containsFloat, containsInt, containsLong, containsMissingValues, containsNull, containsObject, containsShort, containsString, dateValue, det, doubleValue, floatValue, getAbsoluteValueMean, getAbsoluteValueSum, getEuklideanValue, getMaxValue, getMeanValue, getMinValue, getRMS, getStdValue, getValueSum, intValue, isSPD, longValue, norm1, norm2, normF, normInf, pdet, rank, setContent, shortValue, stringValue, trace
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Constructor Detail
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AbstractDenseDoubleMatrix2D
public AbstractDenseDoubleMatrix2D(long rows, long columns)
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Method Detail
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getObject
public final java.lang.Double getObject(long row, long column)- Specified by:
getObjectin interfaceGenericMatrix2D<java.lang.Double>- Overrides:
getObjectin classAbstractGenericMatrix<java.lang.Double>
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setObject
public final void setObject(java.lang.Double o, long row, long column)- Specified by:
setObjectin interfaceGenericMatrix2D<java.lang.Double>- Overrides:
setObjectin classAbstractGenericMatrix<java.lang.Double>
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getObject
public final java.lang.Double getObject(int row, int column)- Specified by:
getObjectin interfaceGenericMatrix2D<java.lang.Double>- Overrides:
getObjectin classAbstractGenericMatrix<java.lang.Double>
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setObject
public final void setObject(java.lang.Double o, int row, int column)- Specified by:
setObjectin interfaceGenericMatrix2D<java.lang.Double>- Overrides:
setObjectin classAbstractGenericMatrix<java.lang.Double>
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getAsDouble
public double getAsDouble(long row, long column)
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getAsDouble
public double getAsDouble(int row, int column)
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setAsDouble
public void setAsDouble(double value, int row, int column)
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setAsDouble
public void setAsDouble(double value, long row, long column)
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isSparse
public final boolean isSparse()
- Specified by:
isSparsein interfaceBaseMatrixProperties
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mtimes
public Matrix mtimes(Matrix m2)
Description copied from interface:BasicDoubleCalculationsPerforms a matrix multiplication on the two matrices. The matrices must be 2-dimensional and have the correct size.- Specified by:
mtimesin interfaceBasicDoubleCalculations- Overrides:
mtimesin classAbstractMatrix- Parameters:
m2- the second matrix- Returns:
- Matrix product
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times
public Matrix times(Matrix m2)
Description copied from interface:BasicDoubleCalculationsCalculates the entrywise product of the two matrices.- Specified by:
timesin interfaceBasicDoubleCalculations- Overrides:
timesin classAbstractMatrix- Parameters:
m2- the second matrix- Returns:
- matrix with product of all entries
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divide
public Matrix divide(Matrix m2)
Description copied from interface:BasicDoubleCalculationsCalculates an entrywise division of the two matrices.- Specified by:
dividein interfaceBasicDoubleCalculations- Overrides:
dividein classAbstractMatrix- Parameters:
m2- the second matrix- Returns:
- matrix with all entries divided by the second matrix's entry.
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plus
public Matrix plus(Matrix m2)
Description copied from interface:BasicDoubleCalculationsCalculates the sum of the entries in both matrices- Specified by:
plusin interfaceBasicDoubleCalculations- Overrides:
plusin classAbstractMatrix- Parameters:
m2- The matrix to add- Returns:
- matrix with sum values
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minus
public Matrix minus(Matrix m2)
Description copied from interface:BasicDoubleCalculationsCalculates the difference of the entries in both matrices- Specified by:
minusin interfaceBasicDoubleCalculations- Overrides:
minusin classAbstractMatrix- Parameters:
m2- The matrix to subtract- Returns:
- matrix with difference values
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minus
public Matrix minus(double v)
Description copied from interface:BasicDoubleCalculationsSubtracts a specified value from all entries in the matrix.- Specified by:
minusin interfaceBasicDoubleCalculations- Overrides:
minusin classAbstractMatrix- Parameters:
v- the value to subtract- Returns:
- Matrix with the entries minus the value
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plus
public Matrix plus(double v)
Description copied from interface:BasicDoubleCalculationsAdds a specified value to all entries in the matrix.- Specified by:
plusin interfaceBasicDoubleCalculations- Overrides:
plusin classAbstractMatrix- Parameters:
v- the value to add- Returns:
- Matrix with the entries plus the value
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times
public Matrix times(double v)
Description copied from interface:BasicDoubleCalculationsMultiplies every entry in the matrix with a scalar.- Specified by:
timesin interfaceBasicDoubleCalculations- Overrides:
timesin classAbstractMatrix- Parameters:
v- factor to multiply with- Returns:
- Matrix with all entries multiplied by a factor.
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divide
public Matrix divide(double v)
Description copied from interface:BasicDoubleCalculationsDivides every entry in the matrix by a scalar.- Specified by:
dividein interfaceBasicDoubleCalculations- Overrides:
dividein classAbstractMatrix- Parameters:
v- factor by which to divide- Returns:
- Matrix with all entries divided by a factor.
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transpose
public Matrix transpose()
Description copied from interface:ObjectCalculationsReturns the transpose of the Matrix, where rows and columns are exchanged. This works also if the Matrix has more than two dimensions.- Specified by:
transposein interfaceObjectCalculations- Overrides:
transposein classAbstractMatrix- Returns:
- transposed Matrix.
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getDimensionCount
public final int getDimensionCount()
- Specified by:
getDimensionCountin interfaceBaseMatrixProperties- Overrides:
getDimensionCountin classAbstractMatrix
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containsCoordinates
public final boolean containsCoordinates(long... coordinates)
Description copied from interface:CoordinateFunctionsDetermines if the given Coordinates are part of the Matrix. If the Matrix is dense, true is returned for all Coordinates smaller than the Matrix's size. For sparse Matrices, this function checks if the coordinates are actually stored in the matrix or not.- Specified by:
containsCoordinatesin interfaceCoordinateFunctions- Parameters:
coordinates- The coordinates to check- Returns:
- a boolean stating if the coordinates are part of the Matrix
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availableCoordinates
public final java.lang.Iterable<long[]> availableCoordinates()
Description copied from interface:CoordinateFunctionsReturns an Iterator that only goes over the coordinates in the Matrix that are stored. For most Matrices, this is the same as allCoordinates(). For sparse Matrices, it iterates only over the entries in it.- Specified by:
availableCoordinatesin interfaceCoordinateFunctions- Returns:
- Iterable over the saved entries in a Matrix.
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