jyplot

Class BarClusterPlot

java.lang.Object

jyplot.BarClusterPlot

All Implemented Interfaces:

java.util.EventListener, ChartMouseListener

public class BarClusterPlot
extends java.lang.Object
implements ChartMouseListener

Creates a series of bar charts where the bars are stacked by the order of present/absent. Basically, values that are present for the first time are stacked above the previous values.

Constructor Summary

Constructors

Constructor and Description
BarClusterPlot()
BarClusterPlot(boolean[][] booleanarrays, java.lang.String[] columnnames, java.lang.String[][] columnorders, java.lang.String[][] domainlabels, java.lang.String[] plottitles)

Method Summary

Modifier and Type	Method and Description
void	chartMouseClicked(ChartMouseEvent event) Callback method for receiving notification of a mouse click on a chart.
void	chartMouseMoved(ChartMouseEvent event) Callback method for receiving notification of a mouse movement on a chart.
java.util.HashMap	computeRectCoords(boolean[][] data) Each rect corresponds to a list of indices (e.g.
static void	main(java.lang.String[] args)

Methods inherited from class java.lang.Object

equals, getClass, hashCode, notify, notifyAll, toString, wait, wait, wait

Constructor Detail

BarClusterPlot

public BarClusterPlot(boolean[][] booleanarrays,
                      java.lang.String[] columnnames,
                      java.lang.String[][] columnorders,
                      java.lang.String[][] domainlabels,
                      java.lang.String[] plottitles)

Parameters:

booleanarrays - Each column is represented as a boolean array.

columnnames - The names of the columns in the boolean arrays

columnorders - The order of the columns. The lenght of the array is the number of plots.

domainlabels - The labels of domains.

plottitles - The titles of the individual plots.

BarClusterPlot

public BarClusterPlot()

Method Detail

computeRectCoords

public java.util.HashMap computeRectCoords(boolean[][] data)

Each rect corresponds to a list of indices (e.g. for genes) This should be computed once. Returns a HashMap of Rectangles to IntArrayList of indices matching the Rectangles.

Parameters:

data - The first index is the row, second is column.

main

public static void main(java.lang.String[] args)

chartMouseClicked

public void chartMouseClicked(ChartMouseEvent event)

Description copied from interface: ChartMouseListener

Callback method for receiving notification of a mouse click on a chart.

Specified by:

chartMouseClicked in interface ChartMouseListener

Parameters:

event - information about the event.

chartMouseMoved

public void chartMouseMoved(ChartMouseEvent event)

Description copied from interface: ChartMouseListener

Callback method for receiving notification of a mouse movement on a chart.

Specified by:

chartMouseMoved in interface ChartMouseListener

Parameters:

event - information about the event.