jhplot

Class HFitter

java.lang.Object

jhplot.HFitter

All Implemented Interfaces:

java.io.Serializable

public class HFitter
extends java.lang.Object
implements java.io.Serializable

Fit data (H1D or P1D). Some details can be found in http://confluence.slac.stanford .edu/display/JAS3/Functions+and+Fitting+Users+Guide

See Also:

Serialized Form

Constructor Summary

Constructors

Constructor and Description
HFitter() Create a fitter with the Chi2 method by default.
HFitter(java.lang.String method) Create a fitter using some method.

Method Summary

Modifier and Type	Method and Description
void	addFunc(java.lang.String name, IFunction f) Add a new function to catalog.
void	doc() Show online documentation.
void	fit(H1D h1d) Fit histogram
void	fit(H2D h2d) Fit H2D histogram
void	fit(P1D p1d) Fit P1D
void	fit(PND pnd) Fit PND (all errors set to be zero).
java.lang.String[]	getFitEngines() Return available fit engines.
java.lang.String	getFitMethod() Returns the current fit method.
java.lang.String[]	getFitMethods() Return available fit methods.
IFunction	getFittedFunc() Get results of the fit in form of function
IFitter	getFitter() Return Jaida fitter
IFunction	getFunc() Return function
java.lang.String[]	getFuncCatalog() Return list of available functions
double	getPar(java.lang.String name) Get parameter value
IFitResult	getResult() Get result of the fit.
void	setFitMethod(java.lang.String method) Sets the fit method.
void	setFunc(IFunction func) Set fit functions
void	setFunc(java.lang.String func) Set fit functions from predefined string.
void	setFunc(java.lang.String name, int dimension, java.lang.String function, java.lang.String parameters) Set functions from a script.
void	setPar(java.lang.String name, double value) Set parameter to a value
void	setParConstraint(java.lang.String constraint) Set parameter constraint Example: Set parameter "mean1" to be identical to "mean2" as: "mean1=mean2"
void	setParFixed(java.lang.String name) Fix a given parameter to a constant value
void	setParFixed(java.lang.String name, boolean fix) Fix a given parameter to a constant value or not
void	setParRange(java.lang.String name, double min, double max) Set range for parameter during the fit
void	setParStep(java.lang.String name, double step) Set step size for parameter (say 0.01)
void	setRange(double rmin, double rmax) Set range for fitting for 1D objects (H1D, P1D)

Methods inherited from class java.lang.Object

equals, getClass, hashCode, notify, notifyAll, toString, wait, wait, wait

Constructor Detail

HFitter

public HFitter(java.lang.String method)

Create a fitter using some method. The supported types are:
uml - unbinned maximum likelihood
leastsquares - least Squares
cleverchi2 - "clever" chi2
chi2 - Chi2 (default)
bml - binned maximum likelihood

When a function is provided to the fitter the user has to be aware that the AIDA prescription is to leave the input function unchanged, create a clone, do the fit on the clone and return the clone in the fit result. There advantage to this approach is that the input function can be reused as is for multiple identical fits while the fitted-cloned function is left unchanged in the fit result. The default is noClone=false.

Parameters:

method - the fit method (Could be: uml, leastsquares, cleverchi2, chi2, bml)

HFitter

public HFitter()

Create a fitter with the Chi2 method by default.

Method Detail

getFitMethods

public java.lang.String[] getFitMethods()

Return available fit methods.

Returns:

Fit methods

getFitMethod

public java.lang.String getFitMethod()

Returns the current fit method.

Returns:

Fit methods

setFitMethod

public void setFitMethod(java.lang.String method)

Sets the fit method. Available methods are: uml, leastsquares, cleverchi2, chi2, bml.

Parameters:

The - fit method.

addFunc

public void addFunc(java.lang.String name,
                    IFunction f)

Add a new function to catalog.

Parameters:

name - function name

f - input function

getFitEngines

public java.lang.String[] getFitEngines()

Return available fit engines.

Returns:

Fit methods

setFunc

public void setFunc(IFunction func)

Set fit functions

getFuncCatalog

public java.lang.String[] getFuncCatalog()

Return list of available functions

Returns:

list of functions

setFunc

public void setFunc(java.lang.String func)

Set fit functions from predefined string.
G - Gaussian
E - Exponential
Pn' - Polynomial (n is an integer, i.e "P0","P1", "P2').

Parameters:

func - string: G (Gaussian),E (exponential),landau (landa),pow (power law), and polynomial: P0,P1,P2,P3..

getPar

public double getPar(java.lang.String name)

Get parameter value

Parameters:

name - parameter name

Returns:

value

setPar

public void setPar(java.lang.String name,
                   double value)

Set parameter to a value

Parameters:

name - parameter name

value - value to be set.

setParStep

public void setParStep(java.lang.String name,
                       double step)

Set step size for parameter (say 0.01)

Parameters:

name - parameter name

step - step used in minimization

setParFixed

public void setParFixed(java.lang.String name)

Fix a given parameter to a constant value

Parameters:

name - parameter name to be fixed

setParFixed

public void setParFixed(java.lang.String name,
                        boolean fix)

Fix a given parameter to a constant value or not

Parameters:

name - parameter name to be fixed or not

fix - true if the parameter should be fixed.

setParRange

public void setParRange(java.lang.String name,
                        double min,
                        double max)

Set range for parameter during the fit

Parameters:

name - parameter name

min - min value

max - max value

setParConstraint

public void setParConstraint(java.lang.String constraint)

Set parameter constraint Example: Set parameter "mean1" to be identical to "mean2" as: "mean1=mean2"

Parameters:

constraint -

getFunc

public IFunction getFunc()

Return function

Returns:

function

setFunc

public void setFunc(java.lang.String name,
                    int dimension,
                    java.lang.String function,
                    java.lang.String parameters)

Set functions from a script. Example:
P2 : setFunc("p2", 1, "a+b*x[0]+c*x[0]*x[0]", "a,b,c")
parabola : setFunc('parabola',1, 'a*x[0]*x[0]+b*x[0]+c','a,b,c')

Parameters:

name - function name

dimension - dimension

function - string representing a function

parameters - parameters (use comma)

fit

public void fit(H1D h1d)

Fit histogram

Parameters:

h1d - input H1D

fit

public void fit(P1D p1d)

Fit P1D

Parameters:

p1d - input P1D

fit

public void fit(PND pnd)

Fit PND (all errors set to be zero). Only last component is "value" of the data, other are positions in dimension-1 space.

Parameters:

pnd - input P1D

fit

public void fit(H2D h2d)

Fit H2D histogram

Parameters:

h2d - input H2D histogram

setRange

public void setRange(double rmin,
                     double rmax)

Set range for fitting for 1D objects (H1D, P1D)

Parameters:

rmin - Min X value

rmax - Max Y value

getFitter

public IFitter getFitter()

Return Jaida fitter

Returns:

fitter

getFittedFunc

public IFunction getFittedFunc()

Get results of the fit in form of function

Returns:

results of the fit in form of function.

getResult

public IFitResult getResult()

Get result of the fit.

Returns:

result of the fit.

doc

public void doc()

Show online documentation.