edu.rit.compbio.seq.test

Class ExtractProtein

java.lang.Object

edu.rit.compbio.seq.test.ExtractProtein

public class ExtractProtein
extends java.lang.Object

Class ExtractProtein is a unit test main program for classes ProteinDatabase and ProteinSequence. The program extracts the protein sequence at a given index from the protein sequence database and prints it on the standard output in FASTA format.

Usage: java edu.rit.compbio.seq.test.ExtractProtein databasefile indexfile index
databasefile = Protein sequence database file
indexfile = Protein sequence index file
index = Protein sequence index

Method Summary

Modifier and Type	Method and Description
static void	main(java.lang.String[] args) Main program.

Methods inherited from class java.lang.Object

equals, getClass, hashCode, notify, notifyAll, toString, wait, wait, wait

Method Detail

main

public static void main(java.lang.String[] args)
                 throws java.lang.Exception

Main program.

Throws:

java.lang.Exception