/*******************************************************************************
* Copyright (c) 2010 Haifeng Li
*
* Licensed under the Apache License, Version 2.0 (the "License");
* you may not use this file except in compliance with the License.
* You may obtain a copy of the License at
*
* http://www.apache.org/licenses/LICENSE-2.0
*
* Unless required by applicable law or agreed to in writing, software
* distributed under the License is distributed on an "AS IS" BASIS,
* WITHOUT WARRANTIES OR CONDITIONS OF ANY KIND, either express or implied.
* See the License for the specific language governing permissions and
* limitations under the License.
*******************************************************************************/
package smile.math.distance;
import java.io.Serializable;
import java.util.Iterator;
import smile.math.SparseArray;
/**
* Manhattan distance, also known as L1 distance or L1
* norm, is the sum of the (absolute) differences of their coordinates. Use
* getInstance() to get the standard unweighted Manhattan distance. Or create
* an instance with a specified weight vector. For float or double arrays,
* missing values (i.e. NaN) are also handled. Also support sparse arrays
* of which zeros are excluded to save space.
*
* @author Haifeng Li
*/
public class SparseManhattanDistance implements Metric, Serializable {
private static final long serialVersionUID = 1L;
/**
* The weights used in weighted distance.
*/
private double[] weight = null;
/**
* Constructor.
*/
public SparseManhattanDistance() {
}
/**
* Constructor.
*
* @param weight the weight vector.
*/
public SparseManhattanDistance(double[] weight) {
for (int i = 0; i < weight.length; i++) {
if (weight[i] < 0)
throw new IllegalArgumentException(String.format("Weight has to be nonnegative: %f", weight[i]));
}
this.weight = weight;
}
@Override
public String toString() {
if (weight != null)
return "Weighted Manhattan distance";
else
return "Manhattan distance";
}
@Override
public double d(SparseArray x, SparseArray y) {
if (x.isEmpty())
throw new IllegalArgumentException("List x is empty.");
if (y.isEmpty())
throw new IllegalArgumentException("List y is empty.");
Iterator iterX = x.iterator();
Iterator iterY = y.iterator();
SparseArray.Entry a = iterX.hasNext() ? iterX.next() : null;
SparseArray.Entry b = iterY.hasNext() ? iterY.next() : null;
double dist = 0.0;
if (weight == null) {
while (a != null && b != null) {
if (a.i < b.i) {
dist += Math.abs(a.x);
a = iterX.hasNext() ? iterX.next() : null;
} else if (a.i > b.i) {
dist += Math.abs(b.x);
b = iterY.hasNext() ? iterY.next() : null;
} else {
dist += Math.abs(a.x - b.x);
a = iterX.hasNext() ? iterX.next() : null;
b = iterY.hasNext() ? iterY.next() : null;
}
}
while (a != null) {
dist += Math.abs(a.x);
a = iterX.hasNext() ? iterX.next() : null;
}
while (b != null) {
dist += Math.abs(b.x);
b = iterY.hasNext() ? iterY.next() : null;
}
} else {
while (a != null && b != null) {
if (a.i < b.i) {
dist += weight[a.i] * Math.abs(a.x);
a = iterX.hasNext() ? iterX.next() : null;
} else if (a.i > b.i) {
dist += weight[b.i] * Math.abs(b.x);
b = iterY.hasNext() ? iterY.next() : null;
} else {
dist += weight[a.i] * Math.abs(a.x - b.x);
a = iterX.hasNext() ? iterX.next() : null;
b = iterY.hasNext() ? iterY.next() : null;
}
}
while (a != null) {
dist += weight[a.i] * Math.abs(a.x);
a = iterX.hasNext() ? iterX.next() : null;
}
while (b != null) {
dist += weight[b.i] * Math.abs(b.x);
b = iterY.hasNext() ? iterY.next() : null;
}
}
return Math.sqrt(dist);
}
}
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