/*******************************************************************************
* Copyright (c) 2010 Haifeng Li
*
* Licensed under the Apache License, Version 2.0 (the "License");
* you may not use this file except in compliance with the License.
* You may obtain a copy of the License at
*
* http://www.apache.org/licenses/LICENSE-2.0
*
* Unless required by applicable law or agreed to in writing, software
* distributed under the License is distributed on an "AS IS" BASIS,
* WITHOUT WARRANTIES OR CONDITIONS OF ANY KIND, either express or implied.
* See the License for the specific language governing permissions and
* limitations under the License.
*******************************************************************************/
package smile.demo.projection;
import java.awt.BorderLayout;
import java.awt.FlowLayout;
import java.awt.event.ActionEvent;
import java.awt.event.ActionListener;
import javax.swing.BorderFactory;
import javax.swing.JButton;
import javax.swing.JComboBox;
import javax.swing.JComponent;
import javax.swing.JLabel;
import javax.swing.JOptionPane;
import javax.swing.JPanel;
import smile.classification.FLD;
import smile.data.AttributeDataset;
import smile.data.NominalAttribute;
import smile.data.parser.DelimitedTextParser;
import smile.plot.Palette;
import smile.plot.PlotCanvas;
import smile.math.Math;
@SuppressWarnings("serial")
public class LDADemo extends JPanel implements Runnable, ActionListener {
private static final String[] datasetName = {
"IRIS", "Pen Digits"
};
private static final String[] datasource = {
"classification/iris.txt",
"pendigits.txt"
};
static AttributeDataset[] dataset = new AttributeDataset[datasetName.length];
static int datasetIndex = 0;
JPanel optionPane;
JComponent canvas;
private JButton startButton;
private JComboBox datasetBox;
char pointLegend = '.';
/**
* Constructor.
*/
public LDADemo() {
startButton = new JButton("Start");
startButton.setActionCommand("startButton");
startButton.addActionListener(this);
datasetBox = new JComboBox<>();
for (int i = 0; i < datasetName.length; i++) {
datasetBox.addItem(datasetName[i]);
}
datasetBox.setSelectedIndex(0);
datasetBox.setActionCommand("datasetBox");
datasetBox.addActionListener(this);
optionPane = new JPanel(new FlowLayout(FlowLayout.LEFT));
optionPane.setBorder(BorderFactory.createRaisedBevelBorder());
optionPane.add(startButton);
optionPane.add(new JLabel("Dataset:"));
optionPane.add(datasetBox);
setLayout(new BorderLayout());
add(optionPane, BorderLayout.NORTH);
}
/**
* Execute the projection algorithm and return a swing JComponent representing
* the clusters.
*/
public JComponent learn() {
double[][] data = dataset[datasetIndex].toArray(new double[dataset[datasetIndex].size()][]);
String[] names = dataset[datasetIndex].toArray(new String[dataset[datasetIndex].size()]);
if (names[0] == null) {
names = null;
}
int[] label = dataset[datasetIndex].toArray(new int[dataset[datasetIndex].size()]);
int min = Math.min(label);
for (int i = 0; i < label.length; i++) {
label[i] -= min;
}
long clock = System.currentTimeMillis();
FLD lda = new FLD(data, label, Math.unique(label).length > 3 ? 3 : 2);
System.out.format("Learn LDA from %d samples in %dms\n", data.length, System.currentTimeMillis()-clock);
double[][] y = lda.project(data);
PlotCanvas plot = new PlotCanvas(Math.colMin(y), Math.colMax(y));
if (names != null) {
plot.points(y, names);
} else if (dataset[datasetIndex].responseAttribute() != null) {
int[] labels = dataset[datasetIndex].toArray(new int[dataset[datasetIndex].size()]);
for (int i = 0; i < y.length; i++) {
plot.point(pointLegend, Palette.COLORS[labels[i]], y[i]);
}
} else {
plot.points(y, pointLegend);
}
plot.setTitle("Linear Discriminant Analysis");
return plot;
}
@Override
public void run() {
startButton.setEnabled(false);
datasetBox.setEnabled(false);
JComponent plot = learn();
if (plot != null) {
if (canvas != null)
remove(canvas);
canvas = plot;
add(plot, BorderLayout.CENTER);
}
validate();
startButton.setEnabled(true);
datasetBox.setEnabled(true);
}
@Override
public void actionPerformed(ActionEvent e) {
if ("startButton".equals(e.getActionCommand())) {
datasetIndex = datasetBox.getSelectedIndex();
if (dataset[datasetIndex] == null) {
DelimitedTextParser parser = new DelimitedTextParser();
parser.setDelimiter("[\t]+");
if (datasetIndex == 0) {
parser.setColumnNames(true);
}
if (datasetIndex == 0) {
parser.setResponseIndex(new NominalAttribute("class"), 4);
}
if (datasetIndex == 1) {
parser.setResponseIndex(new NominalAttribute("class"), 16);
}
try {
dataset[datasetIndex] = parser.parse(datasetName[datasetIndex], smile.data.parser.IOUtils.getTestDataFile(datasource[datasetIndex]));
} catch (Exception ex) {
JOptionPane.showMessageDialog(null, "Failed to load dataset.", "ERROR", JOptionPane.ERROR_MESSAGE);
System.out.println(ex);
}
}
if (dataset[datasetIndex].size() < 500) {
pointLegend = 'o';
} else {
pointLegend = '.';
}
Thread thread = new Thread(this);
thread.start();
}
}
@Override
public String toString() {
return "Linear Discriminant Analysis";
}
}
Ads help maintain this website.