/*******************************************************************************
* Copyright (c) 2010 Haifeng Li
*
* Licensed under the Apache License, Version 2.0 (the "License");
* you may not use this file except in compliance with the License.
* You may obtain a copy of the License at
*
* http://www.apache.org/licenses/LICENSE-2.0
*
* Unless required by applicable law or agreed to in writing, software
* distributed under the License is distributed on an "AS IS" BASIS,
* WITHOUT WARRANTIES OR CONDITIONS OF ANY KIND, either express or implied.
* See the License for the specific language governing permissions and
* limitations under the License.
*******************************************************************************/
package smile.demo.mds;
import java.awt.BorderLayout;
import java.awt.Dimension;
import java.awt.FlowLayout;
import java.awt.GridLayout;
import java.awt.event.ActionEvent;
import java.awt.event.ActionListener;
import javax.swing.BorderFactory;
import javax.swing.JButton;
import javax.swing.JComboBox;
import javax.swing.JComponent;
import javax.swing.JFrame;
import javax.swing.JLabel;
import javax.swing.JOptionPane;
import javax.swing.JPanel;
import smile.data.Attribute;
import smile.data.AttributeDataset;
import smile.data.parser.DelimitedTextParser;
import smile.mds.SammonMapping;
import smile.plot.PlotCanvas;
import smile.plot.ScatterPlot;
@SuppressWarnings("serial")
public class SammonMappingDemo extends JPanel implements Runnable, ActionListener {
private static final String[] datasetName = {
"British Towns", "Euro Cities", "Morse Code", "Color Stimuli", "Lloyds Bank Employees 1905-1909", "Lloyds Bank Employees 1925-1929"
};
private static final String[] datasource = {
"projection/BritishTowns.txt",
"projection/eurodist.txt",
"projection/morsecode.txt",
"projection/colorstimuli.txt",
"projection/bank05d.txt",
"projection/bank25d.txt"
};
static AttributeDataset[] dataset = new AttributeDataset[datasetName.length];
static int datasetIndex = 0;
JPanel optionPane;
JComponent canvas;
private JButton startButton;
private JComboBox datasetBox;
/**
* Constructor.
*/
public SammonMappingDemo() {
startButton = new JButton("Start");
startButton.setActionCommand("startButton");
startButton.addActionListener(this);
datasetBox = new JComboBox<>();
for (int i = 0; i < datasetName.length; i++) {
datasetBox.addItem(datasetName[i]);
}
datasetBox.setSelectedIndex(0);
datasetBox.setActionCommand("datasetBox");
datasetBox.addActionListener(this);
optionPane = new JPanel(new FlowLayout(FlowLayout.LEFT));
optionPane.setBorder(BorderFactory.createRaisedBevelBorder());
optionPane.add(startButton);
optionPane.add(new JLabel("Dataset:"));
optionPane.add(datasetBox);
setLayout(new BorderLayout());
add(optionPane, BorderLayout.NORTH);
}
/**
* Execute the MDS algorithm and return a swing JComponent representing
* the clusters.
*/
public JComponent learn() {
JPanel pane = new JPanel(new GridLayout(1, 2));
double[][] data = dataset[datasetIndex].toArray(new double[dataset[datasetIndex].size()][]);
String[] labels = dataset[datasetIndex].toArray(new String[dataset[datasetIndex].size()]);
if (labels[0] == null) {
Attribute[] attr = dataset[datasetIndex].attributes();
labels = new String[attr.length];
for (int i = 0; i < labels.length; i++) {
labels[i] = attr[i].getName();
}
}
long clock = System.currentTimeMillis();
SammonMapping sammon = new SammonMapping(data, 2);
System.out.format("Learn Sammon's Mapping (k=2) from %d samples in %dms\n", data.length, System.currentTimeMillis()-clock);
PlotCanvas plot = ScatterPlot.plot(sammon.getCoordinates(), labels);
plot.setTitle("Sammon's Mapping (k = 2)");
pane.add(plot);
clock = System.currentTimeMillis();
sammon = new SammonMapping(data, 3);
System.out.format("Learn Sammon's Mapping (k=3) from %d samples in %dms\n", data.length, System.currentTimeMillis()-clock);
plot = ScatterPlot.plot(sammon.getCoordinates(), labels);
plot.setTitle("Sammon's Mapping (k = 3)");
pane.add(plot);
return pane;
}
@Override
public void run() {
startButton.setEnabled(false);
datasetBox.setEnabled(false);
try {
JComponent plot = learn();
if (plot != null) {
if (canvas != null)
remove(canvas);
canvas = plot;
add(plot, BorderLayout.CENTER);
}
validate();
} catch (Exception ex) {
System.err.println(ex);
}
startButton.setEnabled(true);
datasetBox.setEnabled(true);
}
@Override
public void actionPerformed(ActionEvent e) {
if ("startButton".equals(e.getActionCommand())) {
datasetIndex = datasetBox.getSelectedIndex();
if (dataset[datasetIndex] == null) {
DelimitedTextParser parser = new DelimitedTextParser();
parser.setDelimiter("[\t]+");
parser.setRowNames(true);
parser.setColumnNames(true);
if (datasetIndex == 2 || datasetIndex == 3) {
parser.setRowNames(false);
}
try {
dataset[datasetIndex] = parser.parse(datasetName[datasetIndex], smile.data.parser.IOUtils.getTestDataFile(datasource[datasetIndex]));
} catch (Exception ex) {
JOptionPane.showMessageDialog(null, "Failed to load dataset.", "ERROR", JOptionPane.ERROR_MESSAGE);
System.err.println(ex);
}
}
Thread thread = new Thread(this);
thread.start();
}
}
@Override
public String toString() {
return "Sammon's Mapping";
}
public static void main(String argv[]) {
SammonMappingDemo demo = new SammonMappingDemo();
JFrame f = new JFrame("Sammon's Mapping");
f.setSize(new Dimension(1000, 1000));
f.setLocationRelativeTo(null);
f.setDefaultCloseOperation(JFrame.EXIT_ON_CLOSE);
f.getContentPane().add(demo);
f.setVisible(true);
}
}
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