/*
* Copyright (c) 2007, DoodleProject
* All rights reserved.
*
* Redistribution and use in source and binary forms, with or without
* modification, are permitted provided that the following conditions
* are met:
*
* Redistributions of source code must retain the above copyright
* notice, this list of conditions and the following disclaimer.
*
* Redistributions in binary form must reproduce the above copyright
* notice, this list of conditions and the following disclaimer in
* the documentation and/or other materials provided with the
* distribution.
*
* Neither the name of DoodleProject nor the names of its
* contributors may be used to endorse or promote products derived
* from this software without specific prior written permission.
*
* THIS SOFTWARE IS PROVIDED BY THE COPYRIGHT HOLDERS AND
* CONTRIBUTORS "AS IS" AND ANY EXPRESS OR IMPLIED WARRANTIES,
* INCLUDING, BUT NOT LIMITED TO, THE IMPLIED WARRANTIES OF
* MERCHANTABILITY AND FITNESS FOR A PARTICULAR PURPOSE ARE
* DISCLAIMED. IN NO EVENT SHALL THE COPYRIGHT OWNER OR CONTRIBUTORS
* BE LIABLE FOR ANY DIRECT, INDIRECT, INCIDENTAL, SPECIAL,
* EXEMPLARY, OR CONSEQUENTIAL DAMAGES (INCLUDING, BUT NOT LIMITED
* TO, PROCUREMENT OF SUBSTITUTE GOODS OR SERVICES; LOSS OF USE,
* DATA, OR PROFITS; OR BUSINESS INTERRUPTION) HOWEVER CAUSED AND ON
* ANY THEORY OF LIABILITY, WHETHER IN CONTRACT, STRICT LIABILITY, OR
* TORT (INCLUDING NEGLIGENCE OR OTHERWISE) ARISING IN ANY WAY OUT OF
* THE USE OF THIS SOFTWARE, EVEN IF ADVISED OF THE POSSIBILITY OF
* SUCH DAMAGE.
*/
package jhplot.math.num.random;
/**
*
* A random variable generator for the Negative Binomial distribution.
*
*
* References:
*
* - Wikipedia contributors, "Negative Binomial Distribution," Wikipedia, The
* Free Encyclopedia,
* http://en.wikipedia.org/wiki/Negative_binomial_distribution
*
*
*
* @since 1.3
* @version $Revision: 1.2 $ $Date: 2007/11/08 17:37:57 $
*/
public class NegativeBinomialRandomVariable extends
AbstractDiscreteRandomVariable {
/** the number of successes to observe. */
private int numberOfSuccesses;
/** the probability of success for each trial. */
private double probabilityOfSuccess;
/**
* Default constructor. Number of successes is set to one and probability of
* success is set to 0.5.
*/
public NegativeBinomialRandomVariable() {
this(1, 0.5);
}
/**
* Create a random variable with the given number of successes and
* probability of success.
*
* @param r the number of successes.
* @param p the probability of success.
*/
public NegativeBinomialRandomVariable(int r, double p) {
this(r, p, new RandomRNG());
}
/**
* Create a random variable with the given parameters.
*
* @param r the number of successes.
* @param p the probability of success.
* @param source the source generator.
*/
public NegativeBinomialRandomVariable(int r, double p, RNG source) {
super(source);
setNumberOfSuccesses(r);
setProbabilityOfSuccess(p);
}
/**
* Access the next random variable using the given generator.
*
* @param r the number of successes.
* @param p the probability of success.
* @param source the source generator.
* @return the next random variable.
*/
public static int nextRandomVariable(int r, double p, RNG source) {
double y = GammaRandomVariable.nextRandomVariable(r, (1.0 - p) / p,
source);
return PoissonRandomVariable.nextRandomVariable(y, source);
}
/**
* Access the number of successes.
*
* @return the number of successes.
*/
private int getNumberOfSuccesses() {
return numberOfSuccesses;
}
/**
* Access probability of success.
*
* @return the probability of success.
*/
private double getProbabilityOfSuccess() {
return probabilityOfSuccess;
}
/**
* Access the next random variable from this generator.
*
* @return the next random variable.
*/
public int nextRandomVariable() {
return nextRandomVariable(getNumberOfSuccesses(),
getProbabilityOfSuccess(), getSource());
}
/**
* Modify the number of successes.
*
* @param r the new number of successes value.
*/
private void setNumberOfSuccesses(int r) {
if (r <= 0) {
throw new IllegalArgumentException(
"number of successes must be positive.");
}
numberOfSuccesses = r;
}
/**
* Modify probability of success.
*
* @param p the new probability of success value.
*/
private void setProbabilityOfSuccess(double p) {
if (Double.isNaN(p) || p <= 0.0 || p >= 1.0) {
throw new IllegalArgumentException("probability of success must"
+ "be between 0.0 and 1.0, exclusive.");
}
probabilityOfSuccess = p;
}
}