package ij.plugin;
import java.awt.*;
import java.awt.image.*;
import java.io.*;
import ij.*;
import ij.io.*;
import ij.process.*;
import ij.util.Tools;
import ij.plugin.frame.Recorder;


/** This plugin opens a tab or comma delimeted text file as an image.
	Modified to accept commas as delimiters on 4/22/08 by 
	Jay Unruh, Stowers Institute for Medical Research. */
public class TextReader implements PlugIn {
    int words = 0, chars = 0, lines = 0, width=1;;
    String directory, name, path;
    boolean hideErrorMessages;
    String firstTok;
    
	public void run(String arg) {
		if (showDialog()) {
			IJ.showStatus("Opening: " + path);
			ImageProcessor ip = open(path);
			if (ip!=null)
				new ImagePlus(name, ip).show();
			if (Recorder.record && Recorder.scriptMode())
				Recorder.recordCall("imp = IJ.openImage(\""+path+"\");");
		}
	}
    
    boolean showDialog() {
        OpenDialog od = new OpenDialog("Open Text Image...", null);
        directory = od.getDirectory();
        name = od.getFileName();
        if (name!=null)
            path = directory + name;
        return name!=null;
    }
    
    /** Displays a file open dialog and opens the specified text file as a float image. */
    public ImageProcessor open() {
        if (showDialog())
            return open(path);
        else
            return null;
    }
    
    /** Opens the specified text file as a float image. */
    public ImageProcessor open(String path) {
        ImageProcessor ip = null;
        try {
            words = chars = lines = 0;
            Reader r = new BufferedReader(new FileReader(path));
            countLines(r);
            r.close();
            r = new BufferedReader(new FileReader(path));
            //int width = words/lines;
            if (width*lines==0)
            	return null;
            float[] pixels = new float[width*lines];
            ip = new FloatProcessor(width, lines, pixels, null);
            read(r, width*lines, pixels);
            r.close();
            int firstRowNaNCount = 0;
            for (int i=0; i0)
                        width = wordsPerLine;
                    if (lines>1 && wordsPerLine!=0 && wordsPerLine!=wordsInPreviousLine)
                        throw new IOException("Line "+lines+ " is not the same length as the first line.");
                    if (wordsPerLine!=0)
                        wordsInPreviousLine = wordsPerLine;
                    wordsPerLine = 0;
                    if (lines%20==0 && width>1 && lines<=width)
                        IJ.showProgress(((double)lines/width)/2.0);
                    break;
                case StreamTokenizer.TT_WORD:
                    words++;
                    wordsPerLine++;
                    break;
            }
        }
        if (wordsPerLine==width) 
            lines++; // last line does not end with EOL
   }

    void read(Reader r, int size, float[] pixels) throws IOException {
        StreamTokenizer tok = new StreamTokenizer(r);
        tok.resetSyntax();
        tok.wordChars(43, 43);
        tok.wordChars(45, 127);
        tok.whitespaceChars(0, 42);
        tok.whitespaceChars(44, 44);
        //tok.wordChars(33, 127);
        //tok.whitespaceChars(0, ' ');
        tok.whitespaceChars(128, 255);
        //tok.parseNumbers();

        int i = 0;
        int inc = size/20;
        if (inc<1)
            inc = 1;
        while (tok.nextToken() != StreamTokenizer.TT_EOF) {
            if (tok.ttype==StreamTokenizer.TT_WORD) {
                if (i==0)
                	firstTok = tok.sval;
                pixels[i++] = (float)Tools.parseDouble(tok.sval, Double.NaN);
                if (i==size)
                    break;
                if (i%inc==0)
                    IJ.showProgress(0.5+((double)i/size)/2.0);
            }
        }
        IJ.showProgress(1.0);
    }

}